RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Kmt5aQ2YDW7 349 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trmt1Q3TX08 663 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt76Q3UV17 594 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Myl10Q62082 202 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tesk2Q8VCT9 570 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pcdhb15Q91Y04 786 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pdk2Q9JK42 407 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ccne2Q9Z238 404 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slfn14V9GXG1 899 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gdap1O88741 358 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cdh15P33146 784 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tac1P41539 130 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hk3Q3TRM8 922 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ogfod1Q3U0K8 545 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sv2cQ69ZS6 727 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arid5bQ8BM75 1188 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Klhl2Q8JZP3 593 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 MlphQ91V27 590 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sdr42e1Q9D665 394 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Poc5Q9DBS8 558 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 GhrlQ9EQX0 117 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gli3Q61602 1583 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ces1bD3Z5G7 567 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm5861F6VCN9 180 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 4933402N22RikF7D1B3 190 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sec24cG3X972 1096 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Copb2O55029 905 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gon7P0C8B4 98 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Alox5P48999 674 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arl4cP61208 192 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyth2P63034 400 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Msx3P70354 204 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Taf1bP97358 586 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cnpy1Q4VAB4 94 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Atp6v1g3Q8BMC1 118 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q8C6G1 249 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cdk8Q8R3L8 464 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Fastkd2Q922E6 689 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gpatch1Q9DBM1 930 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Erap1Q9EQH2 930 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 IdeQ9JHR7 1019 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Txnrd1Q9JMH6 613 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rad18Q9QXK2 509 aaKnown RBP4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Chek2Q9Z265 546 aa4.79□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Krt6aP50446 553 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trim63Q38HM4 350 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nutm2Q3V0C3 733 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ccdc185Q3V118 621 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Oog4Q4G0C7 502 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm4952Q5FW57 296 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Vmn1r209Q5NC97 312 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 ZyxQ62523 564 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Fam214aQ69ZK7 1075 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Bola2Q8BGS2 86 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Znf76Q8BMU0 568 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 ClmnQ8C5W0 1052 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gmcl1Q920G9 524 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Emilin1Q99K41 1017 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dph6Q9CQ28 267 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rec114Q9CWH4 259 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Lrrc17Q9CXD9 443 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trpc7Q9WVC5 862 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 MeiocA2AG06 965 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm3264L7N2C5 238 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Efna5O08543 228 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 EsrraO08580 422 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 C1dO35473 141 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ap1g2O88512 791 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Zfy2P20662 777 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rplp2P99027 115 aaKnown RBP4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 ZbbxQ0P5X5 716 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ccdc127Q3TC33 260 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slc9a1Q61165 820 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ccna1Q61456 421 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 FtoQ8BGW1 502 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kbtbd3Q8BHI4 607 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pcdha5Q91Y15 934 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pds5aQ6A026 1332 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Scn4aQ9ER60 1841 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rap1gapA2ALS5 663 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Hmx1O70218 332 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Aff1O88573 1216 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rps12P63323 132 aaKnown RBP4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Irf6P97431 467 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rnaseh2bQ80ZV0 308 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slc25a24Q8BMD8 475 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ttc22Q8C159 568 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arfip2Q8K221 341 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Znf445Q8R2V3 986 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pdk3Q922H2 415 aaKnown RBP4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mrps9Q9D7N3 390 aaKnown RBP4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sh2b2Q9JID9 621 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tmem47Q9JJG6 181 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q3TQQ9 903 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 BoraQ8BS90 525 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Btbd9Q8C726 612 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Unc5bQ8K1S3 945 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tmed2Q9R0Q3 201 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Apol6B7ZC55 329 aa4.78□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sgo2bJ3QMK1 1167 aa4.78□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms