RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W DAL3P32459 195 aa8.72□□□□□ -1.01
PRE6YOL038W NAT2P37293 288 aa8.72□□□□□ -1.01
PRE6YOL038W OSH7P38755 437 aa8.72□□□□□ -1.01
PRE6YOL038W YPL108WQ02872 168 aaPredicted RBP8.72□□□□□ -1.01
PRE6YOL038W MCM21Q06675 368 aa8.72□□□□□ -1.01
PRE6YOL038W RFM1Q12192 310 aa8.72□□□□□ -1.01
PRE6YOL038W FUR4P05316 633 aaKnown RBP8.71□□□□□ -1.02
PRE6YOL038W PAU2P32612 120 aa8.71□□□□□ -1.02
PRE6YOL038W AGA2P32781 87 aa8.71□□□□□ -1.02
PRE6YOL038W SNC2P33328 115 aa8.71□□□□□ -1.02
PRE6YOL038W UTP11P34247 250 aaPredicted RBP8.71□□□□□ -1.02
PRE6YOL038W PCL6P40038 420 aa8.71□□□□□ -1.02
PRE6YOL038W ADH6Q04894 360 aaKnown RBP8.71□□□□□ -1.02
PRE6YOL038W YOR186WQ08560 144 aa8.71□□□□□ -1.02
PRE6YOL038W TIR4Q12218 487 aaPredicted RBP8.71□□□□□ -1.02
PRE6YOL038W RPL25P04456 142 aaKnown RBP8.7□□□□□ -1.02
PRE6YOL038W PEX4P29340 183 aa8.7□□□□□ -1.02
PRE6YOL038W SFK1P35735 353 aa8.7□□□□□ -1.02
PRE6YOL038W YNK1P36010 153 aaKnown RBP8.7□□□□□ -1.02
PRE6YOL038W SHE2P36068 246 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
PRE6YOL038W YCR041WP37265 110 aa8.7□□□□□ -1.02
PRE6YOL038W ADH5P38113 351 aaKnown RBP8.7□□□□□ -1.02
PRE6YOL038W TAX4P47030 604 aa8.7□□□□□ -1.02
PRE6YOL038W DOC1P53068 250 aa8.7□□□□□ -1.02
PRE6YOL038W YGL114WP53134 725 aa8.7□□□□□ -1.02
PRE6YOL038W MRH4P53166 561 aa8.7□□□□□ -1.02
PRE6YOL038W YDR415CQ04033 374 aaPredicted RBP8.7□□□□□ -1.02
PRE6YOL038W IES3Q12345 250 aa8.7□□□□□ -1.02
PRE6YOL038W ATP10P18496 279 aa8.69□□□□□ -1.02
PRE6YOL038W YKL063CP35725 167 aa8.69□□□□□ -1.02
PRE6YOL038W UMP1P38293 148 aa8.69□□□□□ -1.02
PRE6YOL038W SOL3P38858 249 aa8.69□□□□□ -1.02
PRE6YOL038W AGE2P40529 298 aa8.69□□□□□ -1.02
PRE6YOL038W MRX5P47007 382 aa8.69□□□□□ -1.02
PRE6YOL038W YGL262WP53054 175 aa8.69□□□□□ -1.02
PRE6YOL038W IMO32P53219 342 aa8.69□□□□□ -1.02
PRE6YOL038W TDA1Q03533 586 aa8.69□□□□□ -1.02
PRE6YOL038W RCF1Q03713 159 aa8.69□□□□□ -1.02
PRE6YOL038W FMP42Q04991 504 aa8.69□□□□□ -1.02
PRE6YOL038W GCN4P03069 281 aa8.68□□□□□ -1.02
PRE6YOL038W PET18P25362 215 aa8.68□□□□□ -1.02
PRE6YOL038W SCW4P53334 386 aaKnown RBP8.68□□□□□ -1.02
PRE6YOL038W RPL21AQ02753 160 aaKnown RBP8.68□□□□□ -1.02
PRE6YOL038W DCP1Q12517 231 aaPredicted RBP8.68□□□□□ -1.02
PRE6YOL038W RPL21BQ12672 160 aaKnown RBP8.68□□□□□ -1.02
PRE6YOL038W PET122P10355 254 aa8.67□□□□□ -1.02
PRE6YOL038W GPX2P38143 162 aa8.67□□□□□ -1.02
PRE6YOL038W ICS2P38284 255 aa8.67□□□□□ -1.02
PRE6YOL038W YJL218WP40892 196 aaKnown RBP8.67□□□□□ -1.02
PRE6YOL038W GWT1P47026 490 aa8.67□□□□□ -1.02
PRE6YOL038W VAM3Q12241 283 aa8.67□□□□□ -1.02
PRE6YOL038W YOR192C-CQ3E736 78 aa8.67□□□□□ -1.02
PRE6YOL038W SUS1Q6WNK7 96 aa8.67□□□□□ -1.02
PRE6YOL038W GDH1P07262 454 aaKnown RBP8.66□□□□□ -1.02
PRE6YOL038W ATG22P25568 528 aa8.66□□□□□ -1.02
PRE6YOL038W VAM7P32912 316 aa8.66□□□□□ -1.02
PRE6YOL038W YBR137WP38276 179 aa8.66□□□□□ -1.02
PRE6YOL038W AIM46P38885 310 aa8.66□□□□□ -1.02
PRE6YOL038W YGR054WP53235 642 aaKnown RBP8.66□□□□□ -1.02
PRE6YOL038W CPR8P53728 308 aa8.66□□□□□ -1.02
PRE6YOL038W UPS1Q05776 175 aa8.66□□□□□ -1.02
PRE6YOL038W LIP2Q06005 328 aa8.66□□□□□ -1.02
PRE6YOL038W ARR2Q06597 130 aa8.66□□□□□ -1.02
PRE6YOL038W YOL118CQ08259 102 aa8.66□□□□□ -1.02
PRE6YOL038W QCR7P00128 127 aa8.65□□□□□ -1.02
PRE6YOL038W YLL053CP0CD98 152 aa8.65□□□□□ -1.02
PRE6YOL038W TMA19P35691 167 aaKnown RBP8.65□□□□□ -1.02
PRE6YOL038W FIG1P38224 298 aa8.65□□□□□ -1.02
PRE6YOL038W ATG18P43601 500 aa8.65□□□□□ -1.02
PRE6YOL038W YNL234WP53857 426 aa8.65□□□□□ -1.02
PRE6YOL038W SOG2Q08817 791 aa8.65□□□□□ -1.02
PRE6YOL038W FCY1Q12178 158 aa8.65□□□□□ -1.02
PRE6YOL038W SPS4P09937 338 aa8.64□□□□□ -1.03
PRE6YOL038W RPS18AP0CX55 146 aaKnown RBP8.64□□□□□ -1.03
PRE6YOL038W RPS18BP0CX56 146 aaPredicted RBP8.64□□□□□ -1.03
PRE6YOL038W YER190C-BP0CX94 160 aa8.64□□□□□ -1.03
PRE6YOL038W YEL077W-AP0CX95 160 aa8.64□□□□□ -1.03
PRE6YOL038W YGR296C-BP0CX96 160 aa8.64□□□□□ -1.03
PRE6YOL038W YPL283W-BP0CX97 160 aa8.64□□□□□ -1.03
PRE6YOL038W YPR204C-AP0CX98 160 aa8.64□□□□□ -1.03
PRE6YOL038W YFL068WP0CX99 160 aa8.64□□□□□ -1.03
PRE6YOL038W YLL066W-AP0CY00 160 aa8.64□□□□□ -1.03
PRE6YOL038W YLL067W-AP0CY01 160 aa8.64□□□□□ -1.03
PRE6YOL038W ZUO1P32527 433 aaKnown RBP8.64□□□□□ -1.03
PRE6YOL038W SWD2P36104 329 aaPredicted RBP8.64□□□□□ -1.03
PRE6YOL038W EDS1P38073 919 aa8.64□□□□□ -1.03
PRE6YOL038W SWD3P38123 315 aa8.64□□□□□ -1.03
PRE6YOL038W CCZ1P38273 704 aa8.64□□□□□ -1.03
PRE6YOL038W PRS2P38620 318 aaKnown RBP8.64□□□□□ -1.03
PRE6YOL038W PSD1P39006 500 aa8.64□□□□□ -1.03
PRE6YOL038W YGR045CP53229 120 aa8.64□□□□□ -1.03
PRE6YOL038W FMP48P53233 369 aa8.64□□□□□ -1.03
PRE6YOL038W OKP1P53298 406 aa8.64□□□□□ -1.03
PRE6YOL038W ALG6Q12001 544 aaKnown RBP8.64□□□□□ -1.03
PRE6YOL038W ATO3Q12359 275 aa8.64□□□□□ -1.03
PRE6YOL038W YBL010CP32788 280 aa8.63□□□□□ -1.03
PRE6YOL038W HSK3P69852 69 aa8.63□□□□□ -1.03
PRE6YOL038W PEX27Q08580 376 aa8.63□□□□□ -1.03
PRE6YOL038W ATG40Q99325 256 aa8.63□□□□□ -1.03
PRE6YOL038W HIS3P06633 220 aa8.62□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms