RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C RSC9Q03124 581 aa2.88□□□□□ -1.95
TOP1YOL006C SDC1Q03323 175 aa2.88□□□□□ -1.95
TOP1YOL006C YML108WQ03759 105 aa2.88□□□□□ -1.95
TOP1YOL006C YMR317WQ04893 1140 aa2.88□□□□□ -1.95
TOP1YOL006C FDH1Q08911 376 aa2.88□□□□□ -1.95
TOP1YOL006C YPL229WQ99395 206 aa2.88□□□□□ -1.95
TOP1YOL006C RPS14AP06367 137 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C SEC4P07560 215 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C ATG15P25641 520 aa2.87□□□□□ -1.95
TOP1YOL006C YCR090CP25654 182 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C TOD6P34219 525 aa2.87□□□□□ -1.95
TOP1YOL006C YBR137WP38276 179 aa2.87□□□□□ -1.95
TOP1YOL006C YBR285WP38354 144 aa2.87□□□□□ -1.95
TOP1YOL006C YHL049CP38722 271 aa2.87□□□□□ -1.95
TOP1YOL006C RPS14BP39516 138 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C HEM14P40012 539 aa2.87□□□□□ -1.95
TOP1YOL006C MAM33P40513 266 aa2.87□□□□□ -1.95
TOP1YOL006C FAR7P43592 221 aa2.87□□□□□ -1.95
TOP1YOL006C LCB3P47013 409 aa2.87□□□□□ -1.95
TOP1YOL006C HST4P53688 370 aa2.87□□□□□ -1.95
TOP1YOL006C TIM8P57744 87 aa2.87□□□□□ -1.95
TOP1YOL006C ELP3Q02908 557 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C YMR206WQ03695 313 aa2.87□□□□□ -1.95
TOP1YOL006C HPT1Q04178 221 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C FAR10Q06001 478 aa2.87□□□□□ -1.95
TOP1YOL006C SUE1Q06524 206 aa2.87□□□□□ -1.95
TOP1YOL006C YLR112WQ12130 139 aa2.87□□□□□ -1.95
TOP1YOL006C EAF3Q12432 401 aa2.87□□□□□ -1.95
TOP1YOL006C HTZ1Q12692 134 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C MHP1P43638 1398 aa2.87□□□□□ -1.95
TOP1YOL006C ERD2P18414 219 aa2.87□□□□□ -1.95
TOP1YOL006C MIR1P23641 311 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C YCR101CP25607 182 aa2.87□□□□□ -1.95
TOP1YOL006C GSP1P32835 219 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C GSP2P32836 220 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C SFK1P35735 353 aa2.87□□□□□ -1.95
TOP1YOL006C GPX1P36014 167 aa2.87□□□□□ -1.95
TOP1YOL006C PRY2P36110 329 aa2.87□□□□□ -1.95
TOP1YOL006C ARN2P38724 620 aa2.87□□□□□ -1.95
TOP1YOL006C PEX17P40155 199 aa2.87□□□□□ -1.95
TOP1YOL006C HAC1P41546 238 aa2.87□□□□□ -1.95
TOP1YOL006C YJR015WP47090 510 aa2.87□□□□□ -1.95
TOP1YOL006C LSM7P53905 115 aaKnown RBP2.87□□□□□ -1.95
TOP1YOL006C YNL046WP53956 172 aa2.87□□□□□ -1.95
TOP1YOL006C RUB1Q03919 77 aa2.87□□□□□ -1.95
TOP1YOL006C SHH4Q06236 168 aa2.87□□□□□ -1.95
TOP1YOL006C RRG7Q08774 242 aaPredicted RBP2.87□□□□□ -1.95
TOP1YOL006C HMS1Q12398 434 aa2.87□□□□□ -1.95
TOP1YOL006C CSR2Q12734 1121 aa2.87□□□□□ -1.95
TOP1YOL006C YPR053CQ6Q5F3 151 aa2.87□□□□□ -1.95
TOP1YOL006C YMR316C-AI2HB70 103 aa2.86□□□□□ -1.95
TOP1YOL006C STE7P06784 515 aa2.86□□□□□ -1.95
TOP1YOL006C ERG24P32462 438 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C TSA1P34760 196 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C TVP38P36164 337 aa2.86□□□□□ -1.95
TOP1YOL006C SOL2P37262 315 aa2.86□□□□□ -1.95
TOP1YOL006C MBA1P38300 278 aa2.86□□□□□ -1.95
TOP1YOL006C GLC8P41818 229 aa2.86□□□□□ -1.95
TOP1YOL006C GPI14P47088 403 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C MRH4P53166 561 aa2.86□□□□□ -1.95
TOP1YOL006C TPC1P53257 314 aa2.86□□□□□ -1.95
TOP1YOL006C DID2P69771 204 aa2.86□□□□□ -1.95
TOP1YOL006C PIR3Q03180 325 aa2.86□□□□□ -1.95
TOP1YOL006C SDH7Q04401 133 aa2.86□□□□□ -1.95
TOP1YOL006C YPL245WQ12179 454 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C SSN2P38931 1420 aa2.86□□□□□ -1.95
TOP1YOL006C BNI1P41832 1953 aa2.86□□□□□ -1.95
TOP1YOL006C YOR304C-AO14468 76 aa2.86□□□□□ -1.95
TOP1YOL006C PBI2P0CT04 75 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C SNF4P12904 322 aa2.86□□□□□ -1.95
TOP1YOL006C SCL1P21243 252 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C ATG22P25568 528 aa2.86□□□□□ -1.95
TOP1YOL006C PEX34P25584 144 aa2.86□□□□□ -1.95
TOP1YOL006C AHC2P25649 128 aa2.86□□□□□ -1.95
TOP1YOL006C FUN26P31381 517 aa2.86□□□□□ -1.95
TOP1YOL006C TFC1P32367 649 aa2.86□□□□□ -1.95
TOP1YOL006C PUB1P32588 453 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
TOP1YOL006C SIP2P34164 415 aaKnown RBP2.86□□□□□ -1.95
TOP1YOL006C TRR2P38816 342 aa2.86□□□□□ -1.95
TOP1YOL006C CHL4P38907 458 aa2.86□□□□□ -1.95
TOP1YOL006C RGI1P40043 161 aaPredicted RBP2.86□□□□□ -1.95
TOP1YOL006C YGL034CP53186 121 aa2.86□□□□□ -1.95
TOP1YOL006C YGR018CP53211 109 aa2.86□□□□□ -1.95
TOP1YOL006C YOR186WQ08560 144 aa2.86□□□□□ -1.95
TOP1YOL006C RPS18AP0CX55 146 aaKnown RBP2.85□□□□□ -1.95
TOP1YOL006C RPS18BP0CX56 146 aaPredicted RBP2.85□□□□□ -1.95
TOP1YOL006C NMT1P14743 455 aa2.85□□□□□ -1.95
TOP1YOL006C YCR022CP25620 114 aa2.85□□□□□ -1.95
TOP1YOL006C XBP1P40489 647 aa2.85□□□□□ -1.95
TOP1YOL006C FMN1Q03778 218 aa2.85□□□□□ -1.95
TOP1YOL006C YDR278CQ05612 105 aa2.85□□□□□ -1.95
TOP1YOL006C PRP11Q07350 266 aaPredicted RBP2.85□□□□□ -1.95
TOP1YOL006C LDB18Q07887 179 aa2.85□□□□□ -1.95
TOP1YOL006C YOL160WQ08321 113 aa2.85□□□□□ -1.95
TOP1YOL006C SYC1Q08553 188 aaPredicted RBP2.85□□□□□ -1.95
TOP1YOL006C RPL25P04456 142 aaKnown RBP2.85□□□□□ -1.95
TOP1YOL006C PMU1P36069 295 aa2.85□□□□□ -1.95
TOP1YOL006C OST1P41543 476 aaKnown RBP2.85□□□□□ -1.95
TOP1YOL006C MEP2P41948 499 aa2.85□□□□□ -1.95
TOP1YOL006C ECL1P48235 211 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms