RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	TAF9	Q05027	157 aa		1.39	□□□□□ -2.19
PKR1	YMR123W	YPL150W	Q12152	901 aa		1.39	□□□□□ -2.19
PKR1	YMR123W	YBL112C	Q3E7Y4	105 aa		1.39	□□□□□ -2.19
PKR1	YMR123W	RAD50	P12753	1312 aa		1.39	□□□□□ -2.19
PKR1	YMR123W	IRA1	P18963	3092 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	ADH3	P07246	375 aa	Known RBP	1.38	□□□□□ -2.19
PKR1	YMR123W	YSR3	P23501	404 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	BMH2	P34730	273 aa	Known RBP	1.38	□□□□□ -2.19
PKR1	YMR123W	MRX3	P38172	270 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	YJL016W	P47072	561 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	GPI8	P49018	411 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	CPD1	P53314	239 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	COS6	P53344	381 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	ARP5	P53946	755 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	SPP2	Q02521	185 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	SDC1	Q03323	175 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	DCR2	Q05924	578 aa		1.38	□□□□□ -2.19
PKR1	YMR123W	NOT5	Q12514	560 aa	Predicted RBP	1.38	□□□□□ -2.19
PKR1	YMR123W	MOT1	P32333	1867 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	MYO1	P08964	1928 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	COS2	P0CX12	379 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	COS3	P0CX13	379 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	VPS3	P23643	1011 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	SIP3	P38717	1229 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	ARN2	P38724	620 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	COA1	P40452	197 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	KEL2	P50090	882 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	CAB4	P53332	305 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	SLM2	P53955	656 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	SFH1	Q06168	426 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	BCP1	Q06338	283 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	EMC6	Q12431	108 aa		1.37	□□□□□ -2.19
PKR1	YMR123W	RAD10	P06838	210 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	RAD3	P06839	778 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	SSA3	P09435	649 aa	Known RBP	1.36	□□□□□ -2.19
PKR1	YMR123W	MATALPHA2	P0CY08	210 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	HMLALPHA2	P0CY09	210 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	CSG2	P35206	410 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	FKS1	P38631	1876 aa	Known RBP	1.36	□□□□□ -2.19
PKR1	YMR123W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.36	□□□□□ -2.19	not detected
PKR1	YMR123W	SPT8	P38915	602 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.36	□□□□□ -2.19	not detected
PKR1	YMR123W	SWS2	P53937	143 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	EGD1	Q02642	157 aa	Known RBP	1.36	□□□□□ -2.19
PKR1	YMR123W	FUS2	Q05670	677 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	GPN3	Q06543	272 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	YOL019W	Q08157	551 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	RRP36	Q12481	300 aa	Predicted RBP	1.36	□□□□□ -2.19
PKR1	YMR123W	RIF1	P29539	1916 aa		1.36	□□□□□ -2.19
PKR1	YMR123W	PRP8	P33334	2413 aa	Known RBP	1.35	□□□□□ -2.19
PKR1	YMR123W	YLR422W	Q06409	1932 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	YMR316C-A	I2HB70	103 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	CAM1	P29547	415 aa	Known RBP	1.35	□□□□□ -2.19
PKR1	YMR123W	RIB7	P33312	244 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	SRX1	P36077	127 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	OPY1	P38271	328 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	FCY21	P40039	528 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	TIF34	P40217	347 aa	Known RBP	1.35	□□□□□ -2.19
PKR1	YMR123W	ERG10	P41338	398 aa	Known RBP	1.35	□□□□□ -2.19
PKR1	YMR123W	YJL118W	P47022	219 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	NBP35	P52920	328 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	COX20	Q04935	205 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	SMT3	Q12306	101 aa	Known RBP	1.35	□□□□□ -2.19
PKR1	YMR123W	MEC1	P38111	2368 aa		1.35	□□□□□ -2.19
PKR1	YMR123W	BEM2	P39960	2167 aa	Known RBP	1.34	□□□□□ -2.19
PKR1	YMR123W	TRA1	P38811	3744 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	MSF1	P08425	469 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	OM45	P16547	393 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	EHD3	P28817	500 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	RPT5	P33297	434 aa	Known RBP	1.34	□□□□□ -2.19
PKR1	YMR123W	YOR062C	P36025	268 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	MRPL37	P36532	105 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	YHL049C	P38722	271 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	TDA11	P38854	504 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	AVT2	P39981	480 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	RTT105	P40063	208 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	GON7	P46984	123 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	YJL027C	P47063	138 aa	Predicted RBP	1.34	□□□□□ -2.19
PKR1	YMR123W	TIM8	P57744	87 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	EBS1	Q03466	884 aa	Known RBP	1.34	□□□□□ -2.19
PKR1	YMR123W	OST6	Q03723	332 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	YMR114C	Q04471	368 aa	Known RBP	1.34	□□□□□ -2.19
PKR1	YMR123W	GPM2	Q12008	311 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	YPL247C	Q12523	523 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	YHR086W-A	Q3E746	53 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	AI5_BETA	Q9ZZX0	354 aa		1.34	□□□□□ -2.19
PKR1	YMR123W	UTP20	P35194	2493 aa	Known RBP	1.34	□□□□□ -2.2
PKR1	YMR123W	CSF1	Q12150	2958 aa		1.34	□□□□□ -2.2
PKR1	YMR123W	YAL064W-B	O13512	126 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	FPR1	P20081	114 aa	Known RBP	1.33	□□□□□ -2.2
PKR1	YMR123W	PPH21	P23594	369 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	DPB2	P24482	689 aa	Predicted RBP	1.33	□□□□□ -2.2
PKR1	YMR123W	PEX3	P28795	441 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	SFC1	P33303	322 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	GDH2	P33327	1092 aa	Known RBP	1.33	□□□□□ -2.2
PKR1	YMR123W	SGE1	P33335	543 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	KDX1	P36005	433 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	ECM13	P38195	257 aa		1.33	□□□□□ -2.2
PKR1	YMR123W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	1.33	□□□□□ -2.2	not detected
PKR1	YMR123W	HSM3	P38348	480 aa		1.33	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 582 ms