RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W MTC7P32633 139 aa4.73□□□□□ -1.65
SPG4YMR107W YKL071WP36086 256 aa4.73□□□□□ -1.65
SPG4YMR107W SSH1P38353 490 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W YMR262WP38430 313 aa4.73□□□□□ -1.65
SPG4YMR107W RRP3P38712 501 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W PCL5P38794 229 aa4.73□□□□□ -1.65
SPG4YMR107W YEA6P39953 335 aa4.73□□□□□ -1.65
SPG4YMR107W NOP16P40007 231 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W GAT2P40209 560 aa4.73□□□□□ -1.65
SPG4YMR107W ATG27P46989 271 aa4.73□□□□□ -1.65
SPG4YMR107W GPI14P47088 403 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W SUT1P53032 299 aaKnown RBP4.73□□□□□ -1.65
SPG4YMR107W APM1Q00776 475 aaPredicted RBP4.73□□□□□ -1.65
SPG4YMR107W STP4Q07351 490 aa4.73□□□□□ -1.65
SPG4YMR107W POM33Q12164 279 aa4.73□□□□□ -1.65
SPG4YMR107W ERV2Q12284 196 aa4.73□□□□□ -1.65
SPG4YMR107W ODC2Q99297 307 aa4.73□□□□□ -1.65
SPG4YMR107W MPD2Q99316 277 aa4.73□□□□□ -1.65
SPG4YMR107W MSB2P32334 1306 aa4.72□□□□□ -1.65
SPG4YMR107W DDI2P0CH63 225 aa4.72□□□□□ -1.65
SPG4YMR107W DDI3P0CH64 225 aa4.72□□□□□ -1.65
SPG4YMR107W URA6P15700 204 aa4.72□□□□□ -1.65
SPG4YMR107W KRR1P25586 316 aaPredicted RBP4.72□□□□□ -1.65
SPG4YMR107W DCG1P32460 244 aa4.72□□□□□ -1.65
SPG4YMR107W TIM23P32897 222 aa4.72□□□□□ -1.65
SPG4YMR107W PAN3P36102 679 aaPredicted RBP4.72□□□□□ -1.65
SPG4YMR107W TRS20P38334 175 aa4.72□□□□□ -1.65
SPG4YMR107W SLM6P38343 150 aa4.72□□□□□ -1.65
SPG4YMR107W YPT35P38815 214 aaKnown RBP4.72□□□□□ -1.65
SPG4YMR107W YHR127WP38833 243 aaKnown RBP4.72□□□□□ -1.65
SPG4YMR107W WSS1P38838 269 aa4.72□□□□□ -1.65
SPG4YMR107W TVP23P38962 199 aa4.72□□□□□ -1.65
SPG4YMR107W YEA4P40004 342 aa4.72□□□□□ -1.65
SPG4YMR107W HEM14P40012 539 aa4.72□□□□□ -1.65
SPG4YMR107W YJL068CP40363 299 aa4.72□□□□□ -1.65
SPG4YMR107W SDP1P40479 209 aa4.72□□□□□ -1.65
SPG4YMR107W CDC40P40968 455 aaPredicted RBP4.72□□□□□ -1.65
SPG4YMR107W PAU5P43575 122 aa4.72□□□□□ -1.65
SPG4YMR107W UFD1P53044 361 aa4.72□□□□□ -1.65
SPG4YMR107W SLX9P53251 210 aaPredicted RBP4.72□□□□□ -1.65
SPG4YMR107W YNL260CP53846 198 aa4.72□□□□□ -1.65
SPG4YMR107W ROT1Q03691 256 aa4.72□□□□□ -1.65
SPG4YMR107W YMR206WQ03695 313 aa4.72□□□□□ -1.65
SPG4YMR107W SPC19Q03954 165 aa4.72□□□□□ -1.65
SPG4YMR107W STP3Q05937 343 aa4.72□□□□□ -1.65
SPG4YMR107W YLR456WQ06199 204 aa4.72□□□□□ -1.65
SPG4YMR107W FYV7Q12247 151 aa4.72□□□□□ -1.65
SPG4YMR107W PET20Q99373 253 aa4.72□□□□□ -1.65
SPG4YMR107W RPS9BP05755 195 aaKnown RBP4.71□□□□□ -1.66
SPG4YMR107W CBS1P14066 229 aa4.71□□□□□ -1.66
SPG4YMR107W RNA15P25299 296 aaPredicted RBP4.71□□□□□ -1.66
SPG4YMR107W GLC7P32598 312 aaKnown RBP4.71□□□□□ -1.66
SPG4YMR107W IML3P38265 245 aa4.71□□□□□ -1.66
SPG4YMR107W POP7P38291 140 aa4.71□□□□□ -1.66
SPG4YMR107W SHG1P38337 142 aa4.71□□□□□ -1.66
SPG4YMR107W LRO1P40345 661 aa4.71□□□□□ -1.66
SPG4YMR107W GWT1P47026 490 aa4.71□□□□□ -1.66
SPG4YMR107W YGL262WP53054 175 aa4.71□□□□□ -1.66
SPG4YMR107W YAF9P53930 226 aa4.71□□□□□ -1.66
SPG4YMR107W SAE3P89114 91 aa4.71□□□□□ -1.66
SPG4YMR107W RUB1Q03919 77 aa4.71□□□□□ -1.66
SPG4YMR107W TMN2Q04562 672 aa4.71□□□□□ -1.66
SPG4YMR107W AIM6Q07716 390 aa4.71□□□□□ -1.66
SPG4YMR107W REX3Q12090 404 aa4.71□□□□□ -1.66
SPG4YMR107W YOP1Q12402 180 aa4.71□□□□□ -1.66
SPG4YMR107W IZH2Q12442 317 aa4.71□□□□□ -1.66
SPG4YMR107W PRM4Q12498 284 aa4.71□□□□□ -1.66
SPG4YMR107W RPS21BQ3E754 87 aaKnown RBP4.71□□□□□ -1.66
SPG4YMR107W YPR053CQ6Q5F3 151 aa4.71□□□□□ -1.66
SPG4YMR107W MRP10O75012 95 aa4.7□□□□□ -1.66
SPG4YMR107W DFR1P07807 211 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
SPG4YMR107W PRE1P22141 198 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W ARO4P32449 370 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W HMT1P38074 348 aa4.7□□□□□ -1.66
SPG4YMR107W MGE1P38523 228 aa4.7□□□□□ -1.66
SPG4YMR107W RPS20P38701 121 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W YHR210CP38893 341 aa4.7□□□□□ -1.66
SPG4YMR107W AVT7P40501 490 aa4.7□□□□□ -1.66
SPG4YMR107W CIN2P46670 268 aa4.7□□□□□ -1.66
SPG4YMR107W YNL134CP53912 376 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W YMR082CQ04276 118 aa4.7□□□□□ -1.66
SPG4YMR107W HNT1Q04344 158 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W GMC1Q04399 608 aa4.7□□□□□ -1.66
SPG4YMR107W NAT5Q08689 176 aa4.7□□□□□ -1.66
SPG4YMR107W HSP33Q08914 237 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W TFB5Q3E7C1 72 aaPredicted RBP4.7□□□□□ -1.66
SPG4YMR107W SRN2Q99176 213 aa4.7□□□□□ -1.66
SPG4YMR107W DET1Q99288 334 aaKnown RBP4.7□□□□□ -1.66
SPG4YMR107W QCR2P07257 368 aa4.69□□□□□ -1.66
SPG4YMR107W HVG1P0CE11 249 aa4.69□□□□□ -1.66
SPG4YMR107W NHP6AP11632 93 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W SCO1P23833 295 aa4.69□□□□□ -1.66
SPG4YMR107W RFA2P26754 273 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W UTR5P32630 166 aa4.69□□□□□ -1.66
SPG4YMR107W MGM101P32787 269 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W MTR2P34232 184 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W UMP1P38293 148 aa4.69□□□□□ -1.66
SPG4YMR107W NSA2P40078 261 aaKnown RBP4.69□□□□□ -1.66
SPG4YMR107W XBP1P40489 647 aa4.69□□□□□ -1.66
SPG4YMR107W CCC1P47818 322 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms