RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C DPM1P14020 267 aaKnown RBP3.85□□□□□ -1.79
CCS1YMR038C PRY2P36110 329 aa3.85□□□□□ -1.79
CCS1YMR038C YKR015CP36111 568 aa3.85□□□□□ -1.79
CCS1YMR038C RPS20P38701 121 aaKnown RBP3.85□□□□□ -1.79
CCS1YMR038C MLH1P38920 769 aa3.85□□□□□ -1.79
CCS1YMR038C OST1P41543 476 aaKnown RBP3.85□□□□□ -1.79
CCS1YMR038C YGL101WP53144 215 aa3.85□□□□□ -1.79
CCS1YMR038C PRM8P53174 237 aa3.85□□□□□ -1.79
CCS1YMR038C YNR064CP53750 290 aa3.85□□□□□ -1.79
CCS1YMR038C DSL1P53847 754 aa3.85□□□□□ -1.79
CCS1YMR038C PRP3Q03338 469 aaPredicted RBP3.85□□□□□ -1.79
CCS1YMR038C YDR391CQ04170 232 aa3.85□□□□□ -1.79
CCS1YMR038C NNT1Q05874 261 aa3.85□□□□□ -1.79
CCS1YMR038C PRP11Q07350 266 aaPredicted RBP3.85□□□□□ -1.79
CCS1YMR038C SIA1Q12212 622 aa3.85□□□□□ -1.79
CCS1YMR038C RAX2Q12465 1220 aa3.85□□□□□ -1.79
CCS1YMR038C DSF1P0CX08 502 aa3.84□□□□□ -1.79
CCS1YMR038C YNR073CP0CX09 502 aa3.84□□□□□ -1.79
CCS1YMR038C ARO3P14843 370 aaKnown RBP3.84□□□□□ -1.79
CCS1YMR038C TFC1P32367 649 aa3.84□□□□□ -1.79
CCS1YMR038C YME2P32843 850 aa3.84□□□□□ -1.79
CCS1YMR038C VPS17P32913 551 aa3.84□□□□□ -1.79
CCS1YMR038C YBR241CP38142 488 aa3.84□□□□□ -1.79
CCS1YMR038C YHR035WP38769 630 aa3.84□□□□□ -1.79
CCS1YMR038C YER184CP39961 794 aa3.84□□□□□ -1.79
CCS1YMR038C AGE2P40529 298 aa3.84□□□□□ -1.79
CCS1YMR038C LOH1P47055 219 aa3.84□□□□□ -1.79
CCS1YMR038C GPI8P49018 411 aa3.84□□□□□ -1.79
CCS1YMR038C YDR114CQ04597 100 aa3.84□□□□□ -1.79
CCS1YMR038C SYC1Q08553 188 aaPredicted RBP3.84□□□□□ -1.79
CCS1YMR038C RRP7P25368 297 aaPredicted RBP3.83□□□□□ -1.8
CCS1YMR038C MIG1P27705 504 aa3.83□□□□□ -1.8
CCS1YMR038C YBR096WP38256 230 aa3.83□□□□□ -1.8
CCS1YMR038C SBE22P38814 852 aa3.83□□□□□ -1.8
CCS1YMR038C CHL4P38907 458 aa3.83□□□□□ -1.8
CCS1YMR038C SPO73P40031 143 aa3.83□□□□□ -1.8
CCS1YMR038C RMR1P53060 241 aa3.83□□□□□ -1.8
CCS1YMR038C ABZ2Q03266 374 aa3.83□□□□□ -1.8
CCS1YMR038C AIM36Q03798 255 aa3.83□□□□□ -1.8
CCS1YMR038C FIN1Q03898 291 aa3.83□□□□□ -1.8
CCS1YMR038C ELP6Q04868 273 aa3.83□□□□□ -1.8
CCS1YMR038C MRPL51Q06090 140 aaPredicted RBP3.83□□□□□ -1.8
CCS1YMR038C YOL159C-AQ3E769 90 aa3.83□□□□□ -1.8
CCS1YMR038C MES1P00958 751 aaKnown RBP3.82□□□□□ -1.8
CCS1YMR038C DFR1P07807 211 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
CCS1YMR038C YAK1P14680 807 aa3.82□□□□□ -1.8
CCS1YMR038C MEK1P24719 497 aaPredicted RBP3.82□□□□□ -1.8
CCS1YMR038C UBC8P28263 218 aa3.82□□□□□ -1.8
CCS1YMR038C DEG1P31115 442 aaKnown RBP3.82□□□□□ -1.8
CCS1YMR038C YNK1P36010 153 aaKnown RBP3.82□□□□□ -1.8
CCS1YMR038C MCH2P36032 473 aa3.82□□□□□ -1.8
CCS1YMR038C GDT1P38301 280 aaPredicted RBP3.82□□□□□ -1.8
CCS1YMR038C SLM1P40485 686 aa3.82□□□□□ -1.8
CCS1YMR038C TIR3P40552 269 aa3.82□□□□□ -1.8
CCS1YMR038C PGA1P53896 198 aa3.82□□□□□ -1.8
CCS1YMR038C OST6Q03723 332 aa3.82□□□□□ -1.8
CCS1YMR038C DTD1Q07648 150 aaKnown RBP3.82□□□□□ -1.8
CCS1YMR038C SCEIP03882 235 aa3.81□□□□□ -1.8
CCS1YMR038C ILV5P06168 395 aaKnown RBP3.81□□□□□ -1.8
CCS1YMR038C MRPS28P21771 286 aa3.81□□□□□ -1.8
CCS1YMR038C SUR1P33300 382 aa3.81□□□□□ -1.8
CCS1YMR038C SRP102P36057 244 aaPredicted RBP3.81□□□□□ -1.8
CCS1YMR038C TCM62P38228 572 aaKnown RBP3.81□□□□□ -1.8
CCS1YMR038C RPS0BP46654 252 aaKnown RBP3.81□□□□□ -1.8
CCS1YMR038C SFH5P47008 294 aa3.81□□□□□ -1.8
CCS1YMR038C YJL016WP47072 561 aa3.81□□□□□ -1.8
CCS1YMR038C GEP7P53171 287 aa3.81□□□□□ -1.8
CCS1YMR038C PXR1P53335 271 aaPredicted RBP3.81□□□□□ -1.8
CCS1YMR038C RNH201P53942 307 aa3.81□□□□□ -1.8
CCS1YMR038C YDC1Q02896 317 aa3.81□□□□□ -1.8
CCS1YMR038C DIG2Q03373 323 aaKnown RBP3.81□□□□□ -1.8
CCS1YMR038C SPC24Q04477 213 aa3.81□□□□□ -1.8
CCS1YMR038C YOR289WQ12012 251 aaPredicted RBP3.81□□□□□ -1.8
CCS1YMR038C YOR029WQ12243 111 aa3.81□□□□□ -1.8
CCS1YMR038C TDH3P00359 332 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
CCS1YMR038C KIN28P06242 306 aa3.8□□□□□ -1.8
CCS1YMR038C YCR007CP25354 239 aa3.8□□□□□ -1.8
CCS1YMR038C TCA17P32613 152 aa3.8□□□□□ -1.8
CCS1YMR038C GPI18P38211 433 aa3.8□□□□□ -1.8
CCS1YMR038C FIG1P38224 298 aa3.8□□□□□ -1.8
CCS1YMR038C FZO1P38297 855 aa3.8□□□□□ -1.8
CCS1YMR038C NSA1P53136 463 aaPredicted RBP3.8□□□□□ -1.8
CCS1YMR038C NQM1P53228 333 aaPredicted RBP3.8□□□□□ -1.8
CCS1YMR038C WSC2P53832 503 aa3.8□□□□□ -1.8
CCS1YMR038C GPI17Q04080 534 aa3.8□□□□□ -1.8
CCS1YMR038C UTP15Q04305 513 aaKnown RBP3.8□□□□□ -1.8
CCS1YMR038C FCY22Q12119 530 aa3.8□□□□□ -1.8
CCS1YMR038C RPL24AP04449 155 aaKnown RBP3.79□□□□□ -1.8
CCS1YMR038C SIR2P06700 562 aa3.79□□□□□ -1.8
CCS1YMR038C YCR022CP25620 114 aa3.79□□□□□ -1.8
CCS1YMR038C RPL5P26321 297 aaKnown RBP3.79□□□□□ -1.8
CCS1YMR038C IES6P32617 166 aa3.79□□□□□ -1.8
CCS1YMR038C YOX1P34161 385 aa3.79□□□□□ -1.8
CCS1YMR038C IPT1P38954 527 aa3.79□□□□□ -1.8
CCS1YMR038C RMD6P39975 231 aa3.79□□□□□ -1.8
CCS1YMR038C RRG9P40156 214 aa3.79□□□□□ -1.8
CCS1YMR038C FAR7P43592 221 aa3.79□□□□□ -1.8
CCS1YMR038C CIN2P46670 268 aa3.79□□□□□ -1.8
CCS1YMR038C VOA1P53262 265 aa3.79□□□□□ -1.8
CCS1YMR038C SAY1P53324 424 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms