RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C TOS8P53147 276 aa2.46□□□□□ -2.02
VPS9YML097C YGR067CP53243 804 aa2.46□□□□□ -2.02
VPS9YML097C TVP15Q03860 143 aa2.46□□□□□ -2.02
VPS9YML097C TIM22Q12328 207 aa2.46□□□□□ -2.02
VPS9YML097C IES3Q12345 250 aa2.46□□□□□ -2.02
VPS9YML097C YBL112CQ3E7Y4 105 aa2.46□□□□□ -2.02
VPS9YML097C SPT3P06844 337 aa2.45□□□□□ -2.02
VPS9YML097C CKA2P19454 339 aa2.45□□□□□ -2.02
VPS9YML097C PRY2P36110 329 aa2.45□□□□□ -2.02
VPS9YML097C YHL044WP38727 235 aa2.45□□□□□ -2.02
VPS9YML097C BXI1P48558 297 aa2.45□□□□□ -2.02
VPS9YML097C RSM27P53305 110 aa2.45□□□□□ -2.02
VPS9YML097C ALG9P53868 555 aaKnown RBP2.45□□□□□ -2.02
VPS9YML097C GRE1Q08969 168 aa2.45□□□□□ -2.02
VPS9YML097C MRX4Q12467 430 aa2.45□□□□□ -2.02
VPS9YML097C CUP2P15315 225 aa2.44□□□□□ -2.02
VPS9YML097C SEC22P22214 214 aa2.44□□□□□ -2.02
VPS9YML097C ADE1P27616 306 aa2.44□□□□□ -2.02
VPS9YML097C OAC1P32332 324 aa2.44□□□□□ -2.02
VPS9YML097C SFC1P33303 322 aa2.44□□□□□ -2.02
VPS9YML097C SRY1P36007 326 aa2.44□□□□□ -2.02
VPS9YML097C YCR087C-AP37263 153 aa2.44□□□□□ -2.02
VPS9YML097C TRM7P38238 310 aaKnown RBP2.44□□□□□ -2.02
VPS9YML097C SLX1P38324 304 aa2.44□□□□□ -2.02
VPS9YML097C GRE3P38715 327 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
VPS9YML097C SPL2P38839 148 aa2.44□□□□□ -2.02
VPS9YML097C YIL001WP40560 513 aa2.44□□□□□ -2.02
VPS9YML097C ECO1P43605 281 aa2.44□□□□□ -2.02
VPS9YML097C YPL264CQ08980 353 aa2.44□□□□□ -2.02
VPS9YML097C PRR2Q12310 699 aa2.44□□□□□ -2.02
VPS9YML097C ISD11Q6Q560 94 aa2.44□□□□□ -2.02
VPS9YML097C YPL229WQ99395 206 aa2.44□□□□□ -2.02
VPS9YML097C ERD2P18414 219 aa2.43□□□□□ -2.02
VPS9YML097C BMH1P29311 267 aaKnown RBP2.43□□□□□ -2.02
VPS9YML097C YOX1P34161 385 aa2.43□□□□□ -2.02
VPS9YML097C MSA2P36157 363 aa2.43□□□□□ -2.02
VPS9YML097C SUR2P38992 349 aa2.43□□□□□ -2.02
VPS9YML097C SEC72P39742 193 aaKnown RBP2.43□□□□□ -2.02
VPS9YML097C PEX17P40155 199 aa2.43□□□□□ -2.02
VPS9YML097C CAT5P41735 233 aa2.43□□□□□ -2.02
VPS9YML097C IRC18P47056 224 aa2.43□□□□□ -2.02
VPS9YML097C MIG2P53035 382 aa2.43□□□□□ -2.02
VPS9YML097C FLC3P53121 802 aa2.43□□□□□ -2.02
VPS9YML097C PDR17P53844 350 aa2.43□□□□□ -2.02
VPS9YML097C BBP1Q12365 385 aa2.43□□□□□ -2.02
VPS9YML097C ATP7P30902 174 aa2.42□□□□□ -2.02
VPS9YML097C RNP1P32385 249 aa2.42□□□□□ -2.02
VPS9YML097C AST1P35183 429 aa2.42□□□□□ -2.02
VPS9YML097C TRR2P38816 342 aa2.42□□□□□ -2.02
VPS9YML097C TEM1P38987 245 aa2.42□□□□□ -2.02
VPS9YML097C ILM1P47155 203 aa2.42□□□□□ -2.02
VPS9YML097C OST3P48439 350 aa2.42□□□□□ -2.02
VPS9YML097C MDM34P53083 459 aa2.42□□□□□ -2.02
VPS9YML097C MMS2P53152 137 aa2.42□□□□□ -2.02
VPS9YML097C ERV29P53337 310 aa2.42□□□□□ -2.02
VPS9YML097C YDR248CQ03786 193 aa2.42□□□□□ -2.02
VPS9YML097C ECM11Q04110 302 aa2.42□□□□□ -2.02
VPS9YML097C PIN3Q06449 215 aa2.42□□□□□ -2.02
VPS9YML097C YPL247CQ12523 523 aa2.42□□□□□ -2.02
VPS9YML097C GCN3P14741 305 aa2.41□□□□□ -2.02
VPS9YML097C ERG24P32462 438 aaKnown RBP2.41□□□□□ -2.02
VPS9YML097C ECM13P38195 257 aa2.41□□□□□ -2.02
VPS9YML097C YER189WP40104 122 aa2.41□□□□□ -2.02
VPS9YML097C YJL016WP47072 561 aa2.41□□□□□ -2.02
VPS9YML097C YGL159WP53110 370 aa2.41□□□□□ -2.02
VPS9YML097C GIS2P53849 153 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
VPS9YML097C DIA1P54005 336 aa2.41□□□□□ -2.02
VPS9YML097C YLR030WQ07967 263 aa2.41□□□□□ -2.02
VPS9YML097C GEP5Q12393 293 aa2.41□□□□□ -2.02
VPS9YML097C YHR139C-AO13536 103 aa2.4□□□□□ -2.02
VPS9YML097C QCR6P00127 147 aa2.4□□□□□ -2.02
VPS9YML097C YOL163WP0CF20 169 aa2.4□□□□□ -2.02
VPS9YML097C KSS1P14681 368 aa2.4□□□□□ -2.02
VPS9YML097C ECM4P36156 370 aa2.4□□□□□ -2.02
VPS9YML097C PFS2P42841 465 aaKnown RBP2.4□□□□□ -2.02
VPS9YML097C SYF2P53277 215 aaPredicted RBP2.4□□□□□ -2.02
VPS9YML097C GTR2P53290 341 aa2.4□□□□□ -2.02
VPS9YML097C HST4P53688 370 aa2.4□□□□□ -2.02
VPS9YML097C YML096WQ04489 525 aa2.4□□□□□ -2.02
VPS9YML097C HTL1Q9URQ5 78 aa2.4□□□□□ -2.02
VPS9YML097C RAD10P06838 210 aa2.39□□□□□ -2.03
VPS9YML097C MET2P08465 486 aa2.39□□□□□ -2.03
VPS9YML097C DSF1P0CX08 502 aa2.39□□□□□ -2.03
VPS9YML097C YNR073CP0CX09 502 aa2.39□□□□□ -2.03
VPS9YML097C FBA1P14540 359 aaKnown RBP2.39□□□□□ -2.03
VPS9YML097C TKL2P33315 681 aa2.39□□□□□ -2.03
VPS9YML097C APS1P35181 156 aa2.39□□□□□ -2.03
VPS9YML097C RCN1P36054 211 aa2.39□□□□□ -2.03
VPS9YML097C YGP1P38616 354 aaKnown RBP2.39□□□□□ -2.03
VPS9YML097C YIL059CP40520 121 aa2.39□□□□□ -2.03
VPS9YML097C YFR045WP43617 309 aa2.39□□□□□ -2.03
VPS9YML097C YPL257WQ08974 193 aa2.39□□□□□ -2.03
VPS9YML097C SMT3Q12306 101 aaKnown RBP2.39□□□□□ -2.03
VPS9YML097C CMC2Q3E7A4 109 aa2.39□□□□□ -2.03
VPS9YML097C YLR462WO13556 202 aa2.38□□□□□ -2.03
VPS9YML097C FCY2P17064 533 aa2.38□□□□□ -2.03
VPS9YML097C SNF6P18888 332 aa2.38□□□□□ -2.03
VPS9YML097C TOM40P23644 387 aaKnown RBP2.38□□□□□ -2.03
VPS9YML097C ARC19P33204 171 aaKnown RBP2.38□□□□□ -2.03
VPS9YML097C MID2P36027 376 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms