RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W PDR17P53844 350 aa1.96□□□□□ -2.1
NUP100YKL068W AIM34Q03673 198 aa1.96□□□□□ -2.1
NUP100YKL068W UTP15Q04305 513 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W INM2Q05533 292 aa1.96□□□□□ -2.1
NUP100YKL068W GAS2Q06135 555 aa1.96□□□□□ -2.1
NUP100YKL068W COQ10Q08058 207 aa1.96□□□□□ -2.1
NUP100YKL068W FRE8Q12209 686 aa1.96□□□□□ -2.1
NUP100YKL068W YGK3Q12222 375 aaPredicted RBP1.96□□□□□ -2.1
NUP100YKL068W MRX4Q12467 430 aa1.96□□□□□ -2.1
NUP100YKL068W IGO2Q9P305 131 aa1.96□□□□□ -2.1
NUP100YKL068W BI3Q9ZZW7 517 aa1.96□□□□□ -2.1
NUP100YKL068W SEC22P22214 214 aa1.96□□□□□ -2.1
NUP100YKL068W AIM17P23180 465 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W AAT2P23542 418 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W OAC1P32332 324 aa1.96□□□□□ -2.1
NUP100YKL068W GLC7P32598 312 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W CAT2P32796 670 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W SPC34P36131 295 aa1.96□□□□□ -2.1
NUP100YKL068W MST28P39552 234 aa1.96□□□□□ -2.1
NUP100YKL068W TOS8P53147 276 aa1.96□□□□□ -2.1
NUP100YKL068W SYF2P53277 215 aaPredicted RBP1.96□□□□□ -2.1
NUP100YKL068W TDA1Q03533 586 aa1.96□□□□□ -2.1
NUP100YKL068W GMC1Q04399 608 aa1.96□□□□□ -2.1
NUP100YKL068W SNX3Q08826 162 aaKnown RBP1.96□□□□□ -2.1
NUP100YKL068W MCT1Q12283 360 aa1.96□□□□□ -2.1
NUP100YKL068W YLR111WQ12528 110 aa1.96□□□□□ -2.1
NUP100YKL068W YIL046W-AQ3E7Z4 54 aa1.96□□□□□ -2.1
NUP100YKL068W CDC28P00546 298 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W CTA1P15202 515 aa1.95□□□□□ -2.1
NUP100YKL068W YCR022CP25620 114 aa1.95□□□□□ -2.1
NUP100YKL068W PDC2P32896 925 aa1.95□□□□□ -2.1
NUP100YKL068W TIP20P33891 701 aa1.95□□□□□ -2.1
NUP100YKL068W CSG2P35206 410 aa1.95□□□□□ -2.1
NUP100YKL068W MRPL28P36527 147 aa1.95□□□□□ -2.1
NUP100YKL068W ECM33P38248 429 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W PSA1P41940 361 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W FMP32P43557 207 aa1.95□□□□□ -2.1
NUP100YKL068W VPS25P47142 202 aa1.95□□□□□ -2.1
NUP100YKL068W SUN4P53616 420 aa1.95□□□□□ -2.1
NUP100YKL068W TDA7P53882 636 aaPredicted RBP1.95□□□□□ -2.1
NUP100YKL068W COG5P53951 403 aa1.95□□□□□ -2.1
NUP100YKL068W SWI1P09547 1314 aa1.95□□□□□ -2.1
NUP100YKL068W COS2P0CX12 379 aa1.95□□□□□ -2.1
NUP100YKL068W COS3P0CX13 379 aa1.95□□□□□ -2.1
NUP100YKL068W YCR023CP25351 611 aa1.95□□□□□ -2.1
NUP100YKL068W RPL16AP26784 199 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W KTI12P34253 313 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W AVT5P38176 459 aa1.95□□□□□ -2.1
NUP100YKL068W SHE3P38272 425 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W ARC40P38328 384 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W YGR018CP53211 109 aa1.95□□□□□ -2.1
NUP100YKL068W YMR027WQ04371 470 aa1.95□□□□□ -2.1
NUP100YKL068W LOA1Q06508 300 aa1.95□□□□□ -2.1
NUP100YKL068W MRX9Q07349 420 aaKnown RBP1.95□□□□□ -2.1
NUP100YKL068W YLR361C-AQ3E795 98 aa1.95□□□□□ -2.1
NUP100YKL068W SPT3P06844 337 aa1.94□□□□□ -2.1
NUP100YKL068W MET2P08465 486 aa1.94□□□□□ -2.1
NUP100YKL068W YKR104WP0CE69 306 aa1.94□□□□□ -2.1
NUP100YKL068W MRPL20P22354 195 aaPredicted RBP1.94□□□□□ -2.1
NUP100YKL068W YBR137WP38276 179 aa1.94□□□□□ -2.1
NUP100YKL068W SLM6P38343 150 aa1.94□□□□□ -2.1
NUP100YKL068W RRP3P38712 501 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W SPL2P38839 148 aa1.94□□□□□ -2.1
NUP100YKL068W OXA1P39952 402 aa1.94□□□□□ -2.1
NUP100YKL068W HEM14P40012 539 aa1.94□□□□□ -2.1
NUP100YKL068W YER137CP40083 148 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W RTS2P40962 232 aa1.94□□□□□ -2.1
NUP100YKL068W RRT5P43607 289 aa1.94□□□□□ -2.1
NUP100YKL068W LCB3P47013 409 aa1.94□□□□□ -2.1
NUP100YKL068W BXI1P48558 297 aa1.94□□□□□ -2.1
NUP100YKL068W YGL039WP53183 348 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W MPA43P53583 542 aaPredicted RBP1.94□□□□□ -2.1
NUP100YKL068W NRM1P53718 249 aa1.94□□□□□ -2.1
NUP100YKL068W YMR279CQ03263 540 aa1.94□□□□□ -2.1
NUP100YKL068W DYN3Q04949 312 aa1.94□□□□□ -2.1
NUP100YKL068W TAF9Q05027 157 aa1.94□□□□□ -2.1
NUP100YKL068W SEI1Q06058 285 aa1.94□□□□□ -2.1
NUP100YKL068W YLR446WQ06204 433 aa1.94□□□□□ -2.1
NUP100YKL068W YLR050CQ12155 161 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W RDI1Q12434 202 aa1.94□□□□□ -2.1
NUP100YKL068W PEX11Q12462 236 aa1.94□□□□□ -2.1
NUP100YKL068W MRS1P07266 363 aa1.94□□□□□ -2.1
NUP100YKL068W RPL23AP0CX41 137 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W RPL23BP0CX42 137 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W GCN3P14741 305 aa1.94□□□□□ -2.1
NUP100YKL068W GRX2P17695 143 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W PHA2P32452 334 aa1.94□□□□□ -2.1
NUP100YKL068W TRM7P38238 310 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W YMR144WP40214 342 aaKnown RBP1.94□□□□□ -2.1
NUP100YKL068W EGT2P42835 1041 aa1.94□□□□□ -2.1
NUP100YKL068W APS3P47064 194 aa1.94□□□□□ -2.1
NUP100YKL068W CPR7P47103 393 aa1.94□□□□□ -2.1
NUP100YKL068W AIM25P47140 327 aa1.94□□□□□ -2.1
NUP100YKL068W PIR3Q03180 325 aa1.94□□□□□ -2.1
NUP100YKL068W YET2Q04210 160 aa1.94□□□□□ -2.1
NUP100YKL068W SPG4Q04438 115 aa1.94□□□□□ -2.1
NUP100YKL068W YMR317WQ04893 1140 aa1.94□□□□□ -2.1
NUP100YKL068W RFM1Q12192 310 aa1.94□□□□□ -2.1
NUP100YKL068W YDL199CQ12407 687 aa1.94□□□□□ -2.1
NUP100YKL068W FOL3Q12676 427 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms