RNA–Protein interactions for RNA: YJR027W

YJR027W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YJR027W, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR027WYJR027W CUP1-1P0CX80 61 aa2.35□□□□□ -2.03
YJR027WYJR027W CUP1-2P0CX81 61 aa2.35□□□□□ -2.03
YJR027WYJR027W HMRA2P0CY13 119 aa2.35□□□□□ -2.03
YJR027WYJR027W MSK1P32048 576 aa2.35□□□□□ -2.03
YJR027WYJR027W RIB7P33312 244 aa2.35□□□□□ -2.03
YJR027WYJR027W IRS4P36115 615 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W MRPL4P36517 319 aa2.35□□□□□ -2.03
YJR027WYJR027W PTC7P38797 343 aa2.35□□□□□ -2.03
YJR027WYJR027W YGL176CP46945 554 aa2.35□□□□□ -2.03
YJR027WYJR027W LSC1P53598 329 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W ATG39Q06159 398 aa2.35□□□□□ -2.03
YJR027WYJR027W FRE6Q12473 712 aa2.35□□□□□ -2.03
YJR027WYJR027W RAS1P01119 309 aa2.35□□□□□ -2.03
YJR027WYJR027W TOM40P23644 387 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W HSP30P25619 332 aa2.35□□□□□ -2.03
YJR027WYJR027W PPZ2P33329 710 aa2.35□□□□□ -2.03
YJR027WYJR027W CMC1P36064 111 aa2.35□□□□□ -2.03
YJR027WYJR027W PEX7P39108 375 aa2.35□□□□□ -2.03
YJR027WYJR027W RPA14P50106 137 aa2.35□□□□□ -2.03
YJR027WYJR027W MIG2P53035 382 aa2.35□□□□□ -2.03
YJR027WYJR027W PRM8P53174 237 aa2.35□□□□□ -2.03
YJR027WYJR027W RIM8P53179 542 aa2.35□□□□□ -2.03
YJR027WYJR027W TDA7P53882 636 aaPredicted RBP2.35□□□□□ -2.03
YJR027WYJR027W SLF1Q12034 447 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W YOS1Q3E834 85 aa2.35□□□□□ -2.03
YJR027WYJR027W NHP6BP11633 99 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W ACH1P32316 526 aa2.35□□□□□ -2.03
YJR027WYJR027W YEL057CP39983 233 aa2.35□□□□□ -2.03
YJR027WYJR027W YJL163CP46996 555 aa2.35□□□□□ -2.03
YJR027WYJR027W MRX5P47007 382 aa2.35□□□□□ -2.03
YJR027WYJR027W YNL046WP53956 172 aa2.35□□□□□ -2.03
YJR027WYJR027W ADD37Q03233 198 aa2.35□□□□□ -2.03
YJR027WYJR027W MCP1Q12106 302 aa2.35□□□□□ -2.03
YJR027WYJR027W RLM1Q12224 676 aa2.35□□□□□ -2.03
YJR027WYJR027W TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
YJR027WYJR027W RPL20AP0CX23 172 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W RPL20BP0CX24 172 aaPredicted RBP2.35□□□□□ -2.03
YJR027WYJR027W ANB1P19211 157 aa2.35□□□□□ -2.03
YJR027WYJR027W EXG1P23776 448 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W PAD1P33751 242 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YJR027WYJR027W SDH4P37298 181 aa2.35□□□□□ -2.03
YJR027WYJR027W ERV15P38312 142 aa2.35□□□□□ -2.03
YJR027WYJR027W COX15P40086 486 aa2.35□□□□□ -2.03
YJR027WYJR027W CWC23P52868 283 aaPredicted RBP2.35□□□□□ -2.03
YJR027WYJR027W YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
YJR027WYJR027W STP4Q07351 490 aa2.35□□□□□ -2.03
YJR027WYJR027W ATX2Q12067 313 aa2.35□□□□□ -2.03
YJR027WYJR027W DAD1Q12248 94 aa2.35□□□□□ -2.03
YJR027WYJR027W YOR192C-CQ3E736 78 aa2.35□□□□□ -2.03
YJR027WYJR027W YKL068W-AQ3E826 78 aa2.35□□□□□ -2.03
YJR027WYJR027W VAR1P02381 398 aa2.34□□□□□ -2.03
YJR027WYJR027W PHO91P27514 894 aa2.34□□□□□ -2.03
YJR027WYJR027W HXT9P40885 567 aa2.34□□□□□ -2.03
YJR027WYJR027W UBX6P47049 396 aa2.34□□□□□ -2.03
YJR027WYJR027W BIO4P53630 237 aa2.34□□□□□ -2.03
YJR027WYJR027W COG5P53951 403 aa2.34□□□□□ -2.03
YJR027WYJR027W HXT11P54862 567 aa2.34□□□□□ -2.03
YJR027WYJR027W ACT1P60010 375 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W SLT2Q00772 484 aa2.34□□□□□ -2.03
YJR027WYJR027W SIA1Q12212 622 aa2.34□□□□□ -2.03
YJR027WYJR027W YLR146W-AQ2V2P1 62 aa2.34□□□□□ -2.03
YJR027WYJR027W UBA3Q99344 299 aa2.34□□□□□ -2.03
YJR027WYJR027W RPL3P14126 387 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W SUA5P32579 426 aa2.34□□□□□ -2.03
YJR027WYJR027W APS1P35181 156 aa2.34□□□□□ -2.03
YJR027WYJR027W EFM4P40516 257 aa2.34□□□□□ -2.03
YJR027WYJR027W SNO3P43544 222 aa2.34□□□□□ -2.03
YJR027WYJR027W CTR1P49573 406 aa2.34□□□□□ -2.03
YJR027WYJR027W YGL185CP53100 379 aa2.34□□□□□ -2.03
YJR027WYJR027W GPG1P53130 126 aa2.34□□□□□ -2.03
YJR027WYJR027W CPD1P53314 239 aa2.34□□□□□ -2.03
YJR027WYJR027W HSP31Q04432 237 aa2.34□□□□□ -2.03
YJR027WYJR027W MSC3Q05812 728 aa2.34□□□□□ -2.03
YJR027WYJR027W ARV1Q06541 321 aa2.34□□□□□ -2.03
YJR027WYJR027W ARR3Q06598 404 aa2.34□□□□□ -2.03
YJR027WYJR027W GEP3Q08622 556 aa2.34□□□□□ -2.03
YJR027WYJR027W YOL159C-AQ3E769 90 aa2.34□□□□□ -2.03
YJR027WYJR027W MCM10P32354 571 aa2.34□□□□□ -2.03
YJR027WYJR027W EMP24P32803 203 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W TES1P41903 349 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W JAC1P53193 184 aa2.34□□□□□ -2.03
YJR027WYJR027W UPS3Q04006 179 aa2.34□□□□□ -2.03
YJR027WYJR027W BNA7Q04066 261 aa2.34□□□□□ -2.03
YJR027WYJR027W YMR310CQ04867 317 aaPredicted RBP2.34□□□□□ -2.03
YJR027WYJR027W YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
YJR027WYJR027W BUD20Q08004 166 aaPredicted RBP2.34□□□□□ -2.03
YJR027WYJR027W MES1P00958 751 aaKnown RBP2.34□□□□□ -2.04
YJR027WYJR027W SIR2P06700 562 aa2.34□□□□□ -2.04
YJR027WYJR027W YEL076C-AP0CX16 216 aa2.34□□□□□ -2.04
YJR027WYJR027W YLR464WP0CX17 216 aa2.34□□□□□ -2.04
YJR027WYJR027W TIR1P10863 254 aa2.34□□□□□ -2.04
YJR027WYJR027W CTA1P15202 515 aa2.34□□□□□ -2.04
YJR027WYJR027W SNC2P33328 115 aa2.34□□□□□ -2.04
YJR027WYJR027W UPS2P35200 230 aa2.34□□□□□ -2.04
YJR027WYJR027W YBR292CP38357 123 aa2.34□□□□□ -2.04
YJR027WYJR027W YEL076CP39971 216 aa2.34□□□□□ -2.04
YJR027WYJR027W RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.04
YJR027WYJR027W YDR209CQ03480 137 aa2.34□□□□□ -2.04
YJR027WYJR027W AGE1Q04412 482 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms