RNA–Protein interactions for RNA: YGR161C-D

YGR161C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161C-D, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161C-DYGR161C-D CUP1-1P0CX80 61 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D CUP1-2P0CX81 61 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D HMRA2P0CY13 119 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D MSK1P32048 576 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RIB7P33312 244 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D IRS4P36115 615 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D MRPL4P36517 319 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D PTC7P38797 343 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YGL176CP46945 554 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D LSC1P53598 329 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D ATG39Q06159 398 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D FRE6Q12473 712 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RAS1P01119 309 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D TOM40P23644 387 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D HSP30P25619 332 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D PPZ2P33329 710 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D CMC1P36064 111 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D PEX7P39108 375 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RPA14P50106 137 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D MIG2P53035 382 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D PRM8P53174 237 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RIM8P53179 542 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D TDA7P53882 636 aaPredicted RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D SLF1Q12034 447 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D YOS1Q3E834 85 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D NHP6BP11633 99 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D ACH1P32316 526 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YEL057CP39983 233 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YJL163CP46996 555 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D MRX5P47007 382 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YNL046WP53956 172 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D ADD37Q03233 198 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D MCP1Q12106 302 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RLM1Q12224 676 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D TAD3Q9URQ3 322 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D RPL20AP0CX23 172 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D RPL20BP0CX24 172 aaPredicted RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D ANB1P19211 157 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D EXG1P23776 448 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D PAD1P33751 242 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YGR161C-DYGR161C-D SDH4P37298 181 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D ERV15P38312 142 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D COX15P40086 486 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D CWC23P52868 283 aaPredicted RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D YHC1Q05900 231 aaKnown RBP2.35□□□□□ -2.03
YGR161C-DYGR161C-D STP4Q07351 490 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D ATX2Q12067 313 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D DAD1Q12248 94 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YOR192C-CQ3E736 78 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D YKL068W-AQ3E826 78 aa2.35□□□□□ -2.03
YGR161C-DYGR161C-D VAR1P02381 398 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D PHO91P27514 894 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D HXT9P40885 567 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D UBX6P47049 396 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D BIO4P53630 237 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D COG5P53951 403 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D HXT11P54862 567 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D ACT1P60010 375 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D SLT2Q00772 484 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D SIA1Q12212 622 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D YLR146W-AQ2V2P1 62 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D UBA3Q99344 299 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D RPL3P14126 387 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D SUA5P32579 426 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D APS1P35181 156 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D EFM4P40516 257 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D SNO3P43544 222 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D CTR1P49573 406 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D YGL185CP53100 379 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D GPG1P53130 126 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D CPD1P53314 239 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D HSP31Q04432 237 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D MSC3Q05812 728 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D ARV1Q06541 321 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D ARR3Q06598 404 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D GEP3Q08622 556 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D YOL159C-AQ3E769 90 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D MCM10P32354 571 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D EMP24P32803 203 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D TES1P41903 349 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D IMD4P50094 524 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D JAC1P53193 184 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D UPS3Q04006 179 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D BNA7Q04066 261 aa2.34□□□□□ -2.03
YGR161C-DYGR161C-D YMR310CQ04867 317 aaPredicted RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D YLR179CQ06252 201 aaKnown RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D BUD20Q08004 166 aaPredicted RBP2.34□□□□□ -2.03
YGR161C-DYGR161C-D MES1P00958 751 aaKnown RBP2.34□□□□□ -2.04
YGR161C-DYGR161C-D SIR2P06700 562 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D YEL076C-AP0CX16 216 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D YLR464WP0CX17 216 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D TIR1P10863 254 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D CTA1P15202 515 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D SNC2P33328 115 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D UPS2P35200 230 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D YBR292CP38357 123 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D YEL076CP39971 216 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.04
YGR161C-DYGR161C-D YDR209CQ03480 137 aa2.34□□□□□ -2.04
YGR161C-DYGR161C-D AGE1Q04412 482 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms