RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W SLC1P33333 303 aa3.33□□□□□ -1.88
SPT6YGR116W CFD1P40558 293 aa3.33□□□□□ -1.88
SPT6YGR116W RSM7P47150 247 aa3.33□□□□□ -1.88
SPT6YGR116W OST3P48439 350 aa3.33□□□□□ -1.88
SPT6YGR116W SMM1P53720 384 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W CTL1Q03220 320 aaKnown RBP3.33□□□□□ -1.88
SPT6YGR116W YDR415CQ04033 374 aaPredicted RBP3.33□□□□□ -1.88
SPT6YGR116W SME1Q12330 94 aaPredicted RBP3.33□□□□□ -1.88
SPT6YGR116W MDM35O60200 86 aa3.32□□□□□ -1.88
SPT6YGR116W QCR2P07257 368 aa3.32□□□□□ -1.88
SPT6YGR116W NHP6AP11632 93 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W RFA3P26755 122 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W PEX7P39108 375 aa3.32□□□□□ -1.88
SPT6YGR116W YEL057CP39983 233 aa3.32□□□□□ -1.88
SPT6YGR116W SMD3P43321 101 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W PRY3P47033 881 aa3.32□□□□□ -1.88
SPT6YGR116W MRX8Q05473 314 aa3.32□□□□□ -1.88
SPT6YGR116W YPL272CQ08984 517 aa3.32□□□□□ -1.88
SPT6YGR116W SUL2Q12325 893 aa3.32□□□□□ -1.88
SPT6YGR116W COX5BP00425 151 aa3.32□□□□□ -1.88
SPT6YGR116W SUI1P32911 108 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W YKL071WP36086 256 aa3.32□□□□□ -1.88
SPT6YGR116W SAF1P38352 637 aa3.32□□□□□ -1.88
SPT6YGR116W NSA2P40078 261 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W IRC24P40580 263 aa3.32□□□□□ -1.88
SPT6YGR116W TOS2P50078 622 aa3.32□□□□□ -1.88
SPT6YGR116W ERG25P53045 309 aa3.32□□□□□ -1.88
SPT6YGR116W YAP1802P53309 568 aa3.32□□□□□ -1.88
SPT6YGR116W YGR250CP53316 781 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W YDR366CP87287 132 aa3.32□□□□□ -1.88
SPT6YGR116W TMA10Q06177 86 aa3.32□□□□□ -1.88
SPT6YGR116W YOR387CQ08910 206 aa3.32□□□□□ -1.88
SPT6YGR116W PDE1P22434 369 aa3.32□□□□□ -1.88
SPT6YGR116W RFA2P26754 273 aaKnown RBP3.32□□□□□ -1.88
SPT6YGR116W COQ3P27680 312 aa3.32□□□□□ -1.88
SPT6YGR116W LDH1P38139 375 aa3.32□□□□□ -1.88
SPT6YGR116W FMP10P40098 244 aa3.32□□□□□ -1.88
SPT6YGR116W YGL235WP53071 178 aa3.32□□□□□ -1.88
SPT6YGR116W YPL014WQ02606 381 aa3.32□□□□□ -1.88
SPT6YGR116W YOP1Q12402 180 aa3.32□□□□□ -1.88
SPT6YGR116W UBA3Q99344 299 aa3.32□□□□□ -1.88
SPT6YGR116W PRE2P30656 287 aaKnown RBP3.31□□□□□ -1.88
SPT6YGR116W TRS65P32893 560 aa3.31□□□□□ -1.88
SPT6YGR116W SSH1P38353 490 aaKnown RBP3.31□□□□□ -1.88
SPT6YGR116W RPB11P38902 120 aa3.31□□□□□ -1.88
SPT6YGR116W ASK10P48361 1146 aa3.31□□□□□ -1.88
SPT6YGR116W YPL067CQ02754 198 aa3.31□□□□□ -1.88
SPT6YGR116W VPS28Q02767 242 aa3.31□□□□□ -1.88
SPT6YGR116W TMN2Q04562 672 aa3.31□□□□□ -1.88
SPT6YGR116W SRF1Q12516 437 aa3.31□□□□□ -1.88
SPT6YGR116W ILV5P06168 395 aaKnown RBP3.31□□□□□ -1.88
SPT6YGR116W NUP1P20676 1076 aa3.31□□□□□ -1.88
SPT6YGR116W ADK2P26364 225 aa3.31□□□□□ -1.88
SPT6YGR116W TIM12P32830 109 aa3.31□□□□□ -1.88
SPT6YGR116W GPX1P36014 167 aa3.31□□□□□ -1.88
SPT6YGR116W YJR012CP47087 207 aa3.31□□□□□ -1.88
SPT6YGR116W BNS1P50084 137 aa3.31□□□□□ -1.88
SPT6YGR116W PDR16P53860 351 aaKnown RBP3.31□□□□□ -1.88
SPT6YGR116W ROY1Q04847 553 aa3.31□□□□□ -1.88
SPT6YGR116W STT4P37297 1900 aa3.31□□□□□ -1.88
SPT6YGR116W RPS25BP0C0T4 108 aaKnown RBP3.31□□□□□ -1.88
SPT6YGR116W TVP23P38962 199 aa3.31□□□□□ -1.88
SPT6YGR116W CDH1P53197 566 aa3.31□□□□□ -1.88
SPT6YGR116W BUD25P85052 153 aa3.31□□□□□ -1.88
SPT6YGR116W EKI1Q03764 534 aa3.31□□□□□ -1.88
SPT6YGR116W ERV2Q12284 196 aa3.31□□□□□ -1.88
SPT6YGR116W RPS25AQ3E792 108 aaPredicted RBP3.31□□□□□ -1.88
SPT6YGR116W RPL9AP05738 191 aaKnown RBP3.3□□□□□ -1.88
SPT6YGR116W PAU1P0CE88 120 aa3.3□□□□□ -1.88
SPT6YGR116W PAU14P0CE89 120 aa3.3□□□□□ -1.88
SPT6YGR116W PAU6P0CE90 120 aa3.3□□□□□ -1.88
SPT6YGR116W PAU18P0CE91 120 aa3.3□□□□□ -1.88
SPT6YGR116W PAU8P0CE92 120 aa3.3□□□□□ -1.88
SPT6YGR116W PAU11P0CE93 120 aa3.3□□□□□ -1.88
SPT6YGR116W SPT23P35210 1082 aa3.3□□□□□ -1.88
SPT6YGR116W MIX23P38162 196 aa3.3□□□□□ -1.88
SPT6YGR116W SLM6P38343 150 aa3.3□□□□□ -1.88
SPT6YGR116W PAU13P38725 120 aa3.3□□□□□ -1.88
SPT6YGR116W RPL9BP51401 191 aaKnown RBP3.3□□□□□ -1.88
SPT6YGR116W PAU4P53427 120 aa3.3□□□□□ -1.88
SPT6YGR116W HHT1P61830 136 aa3.3□□□□□ -1.88
SPT6YGR116W PAU10Q03050 120 aa3.3□□□□□ -1.88
SPT6YGR116W ASM4Q05166 528 aa3.3□□□□□ -1.88
SPT6YGR116W MCH1Q07376 486 aa3.3□□□□□ -1.88
SPT6YGR116W PAU20Q08322 120 aa3.3□□□□□ -1.88
SPT6YGR116W RAX2Q12465 1220 aa3.3□□□□□ -1.88
SPT6YGR116W PAU9Q3E770 120 aa3.3□□□□□ -1.88
SPT6YGR116W NPR1P22211 790 aa3.3□□□□□ -1.88
SPT6YGR116W MDH3P32419 343 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SPT6YGR116W ERG1P32476 496 aaKnown RBP3.3□□□□□ -1.88
SPT6YGR116W PMU1P36069 295 aa3.3□□□□□ -1.88
SPT6YGR116W EMC4P53073 190 aa3.3□□□□□ -1.88
SPT6YGR116W YMR090WQ04304 227 aaKnown RBP3.3□□□□□ -1.88
SPT6YGR116W ISR1Q06098 443 aaKnown RBP3.3□□□□□ -1.88
SPT6YGR116W YPL257WQ08974 193 aa3.3□□□□□ -1.88
SPT6YGR116W YMR084WA2P2R3 262 aa3.3□□□□□ -1.88
SPT6YGR116W RNQ1P25367 405 aa3.3□□□□□ -1.88
SPT6YGR116W NFS1P25374 497 aa3.3□□□□□ -1.88
SPT6YGR116W SRB5P32585 307 aa3.3□□□□□ -1.88
SPT6YGR116W UPS2P35200 230 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms