RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W NAM2P11325 894 aa5.33□□□□□ -1.56
MSP1YGR028W RPL30P14120 105 aaKnown RBP5.33□□□□□ -1.56
MSP1YGR028W IDP1P21954 428 aaKnown RBP5.33□□□□□ -1.56
MSP1YGR028W PRP21P32524 280 aaPredicted RBP5.33□□□□□ -1.56
MSP1YGR028W ECT1P33412 323 aa5.33□□□□□ -1.56
MSP1YGR028W ARC40P38328 384 aaKnown RBP5.33□□□□□ -1.56
MSP1YGR028W SLM1P40485 686 aa5.33□□□□□ -1.56
MSP1YGR028W FMC1P40491 155 aa5.33□□□□□ -1.56
MSP1YGR028W SGN1P40561 250 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
MSP1YGR028W PAM16P42949 149 aa5.33□□□□□ -1.56
MSP1YGR028W ABM1P47146 123 aa5.33□□□□□ -1.56
MSP1YGR028W SMM1P53720 384 aaKnown RBP5.33□□□□□ -1.56
MSP1YGR028W YNR048WP53740 393 aa5.33□□□□□ -1.56
MSP1YGR028W YNR064CP53750 290 aa5.33□□□□□ -1.56
MSP1YGR028W AAH1P53909 347 aa5.33□□□□□ -1.56
MSP1YGR028W ARP10Q04549 284 aa5.33□□□□□ -1.56
MSP1YGR028W ISA2Q12425 185 aa5.33□□□□□ -1.56
MSP1YGR028W RPL15AP05748 204 aaKnown RBP5.32□□□□□ -1.56
MSP1YGR028W SGA1P08019 549 aa5.32□□□□□ -1.56
MSP1YGR028W AQY1P0CD91 305 aa5.32□□□□□ -1.56
MSP1YGR028W FAR1P21268 830 aa5.32□□□□□ -1.56
MSP1YGR028W REC114P32841 428 aa5.32□□□□□ -1.56
MSP1YGR028W TCM62P38228 572 aaKnown RBP5.32□□□□□ -1.56
MSP1YGR028W PEX32P38292 413 aa5.32□□□□□ -1.56
MSP1YGR028W YBR285WP38354 144 aa5.32□□□□□ -1.56
MSP1YGR028W MDM31P38880 579 aa5.32□□□□□ -1.56
MSP1YGR028W PHB2P50085 310 aa5.32□□□□□ -1.56
MSP1YGR028W NRK1P53915 240 aa5.32□□□□□ -1.56
MSP1YGR028W RPL15BP54780 204 aaPredicted RBP5.32□□□□□ -1.56
MSP1YGR028W GAL83Q04739 417 aa5.32□□□□□ -1.56
MSP1YGR028W YPR098CQ06089 161 aa5.32□□□□□ -1.56
MSP1YGR028W GSH2Q08220 491 aa5.32□□□□□ -1.56
MSP1YGR028W YGK3Q12222 375 aaPredicted RBP5.32□□□□□ -1.56
MSP1YGR028W SIR2P06700 562 aa5.31□□□□□ -1.56
MSP1YGR028W THI2P38141 450 aa5.31□□□□□ -1.56
MSP1YGR028W LNP1P38878 278 aa5.31□□□□□ -1.56
MSP1YGR028W EGD2P38879 174 aaKnown RBP5.31□□□□□ -1.56
MSP1YGR028W SOP4P39543 234 aaPredicted RBP5.31□□□□□ -1.56
MSP1YGR028W DLS1P40366 167 aa5.31□□□□□ -1.56
MSP1YGR028W ILM1P47155 203 aa5.31□□□□□ -1.56
MSP1YGR028W CCC1P47818 322 aa5.31□□□□□ -1.56
MSP1YGR028W VMA10P48836 114 aaKnown RBP5.31□□□□□ -1.56
MSP1YGR028W GEP7P53171 287 aa5.31□□□□□ -1.56
MSP1YGR028W HHT1P61830 136 aa5.31□□□□□ -1.56
MSP1YGR028W NMA1Q06178 401 aaKnown RBP5.31□□□□□ -1.56
MSP1YGR028W YLR173WQ06247 608 aa5.31□□□□□ -1.56
MSP1YGR028W IRC25Q07951 179 aa5.31□□□□□ -1.56
MSP1YGR028W YOR029WQ12243 111 aa5.31□□□□□ -1.56
MSP1YGR028W ERP4Q12450 207 aa5.31□□□□□ -1.56
MSP1YGR028W YGL041W-AP0C5N3 154 aa5.3□□□□□ -1.56
MSP1YGR028W MDM10P18409 493 aa5.3□□□□□ -1.56
MSP1YGR028W SAG1P20840 650 aa5.3□□□□□ -1.56
MSP1YGR028W APA2P22108 325 aa5.3□□□□□ -1.56
MSP1YGR028W YOX1P34161 385 aa5.3□□□□□ -1.56
MSP1YGR028W TIF3P34167 436 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W ECM4P36156 370 aa5.3□□□□□ -1.56
MSP1YGR028W RMD6P39975 231 aa5.3□□□□□ -1.56
MSP1YGR028W YND1P40009 630 aa5.3□□□□□ -1.56
MSP1YGR028W YER079WP40052 210 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W LYS20P48570 428 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W YGL159WP53110 370 aa5.3□□□□□ -1.56
MSP1YGR028W NSA1P53136 463 aaPredicted RBP5.3□□□□□ -1.56
MSP1YGR028W YLR152CP54072 576 aa5.3□□□□□ -1.56
MSP1YGR028W PRM15Q03262 622 aa5.3□□□□□ -1.56
MSP1YGR028W YDR248CQ03786 193 aa5.3□□□□□ -1.56
MSP1YGR028W CAC2Q04199 468 aa5.3□□□□□ -1.56
MSP1YGR028W UTP15Q04305 513 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W YMR252CQ04814 134 aa5.3□□□□□ -1.56
MSP1YGR028W YMR317WQ04893 1140 aa5.3□□□□□ -1.56
MSP1YGR028W ASR1Q06834 288 aa5.3□□□□□ -1.56
MSP1YGR028W RFU1Q08003 200 aa5.3□□□□□ -1.56
MSP1YGR028W THP3Q12049 470 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W FCY22Q12119 530 aa5.3□□□□□ -1.56
MSP1YGR028W LYS21Q12122 440 aaKnown RBP5.3□□□□□ -1.56
MSP1YGR028W YCR061WP25639 631 aa5.29□□□□□ -1.56
MSP1YGR028W FUN26P31381 517 aa5.29□□□□□ -1.56
MSP1YGR028W AFG1P32317 509 aa5.29□□□□□ -1.56
MSP1YGR028W SSH1P38353 490 aaKnown RBP5.29□□□□□ -1.56
MSP1YGR028W ATP23P53722 227 aa5.29□□□□□ -1.56
MSP1YGR028W YKR005CQ02203 525 aa5.29□□□□□ -1.56
MSP1YGR028W YDL009CQ12210 107 aa5.29□□□□□ -1.56
MSP1YGR028W YPR1Q12458 312 aa5.29□□□□□ -1.56
MSP1YGR028W VCX1Q99385 411 aa5.29□□□□□ -1.56
MSP1YGR028W REP2P03872 296 aa5.28□□□□□ -1.56
MSP1YGR028W MRPS28P21771 286 aa5.28□□□□□ -1.56
MSP1YGR028W ZRT3P34240 503 aa5.28□□□□□ -1.56
MSP1YGR028W GPI18P38211 433 aa5.28□□□□□ -1.56
MSP1YGR028W ERJ5P43613 295 aaPredicted RBP5.28□□□□□ -1.56
MSP1YGR028W GON7P46984 123 aa5.28□□□□□ -1.56
MSP1YGR028W AVT4P50944 713 aa5.28□□□□□ -1.56
MSP1YGR028W TLG1Q03322 224 aa5.28□□□□□ -1.56
MSP1YGR028W TSR2Q06672 205 aaKnown RBP5.28□□□□□ -1.56
MSP1YGR028W PRP11Q07350 266 aaPredicted RBP5.28□□□□□ -1.56
MSP1YGR028W YOL114CQ12322 202 aa5.28□□□□□ -1.56
MSP1YGR028W YMR105W-AQ8TGS8 64 aa5.28□□□□□ -1.56
MSP1YGR028W IES6P32617 166 aa5.27□□□□□ -1.57
MSP1YGR028W PIR5P46999 287 aa5.27□□□□□ -1.57
MSP1YGR028W PAU12P53343 120 aa5.27□□□□□ -1.57
MSP1YGR028W WSC2P53832 503 aa5.27□□□□□ -1.57
MSP1YGR028W HEM25Q07534 307 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms