RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C ASH1P34233 588 aa4.36□□□□□ -1.71
SEC9YGR009C SRY1P36007 326 aa4.36□□□□□ -1.71
SEC9YGR009C MRPL28P36527 147 aa4.36□□□□□ -1.71
SEC9YGR009C LSM2P38203 95 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C YBR096WP38256 230 aa4.36□□□□□ -1.71
SEC9YGR009C LYS1P38998 373 aaRIP-Chip data4.36□□□□□ -1.71not detected
SEC9YGR009C PEX7P39108 375 aa4.36□□□□□ -1.71
SEC9YGR009C FIS1P40515 155 aa4.36□□□□□ -1.71
SEC9YGR009C TAD2P47058 250 aa4.36□□□□□ -1.71
SEC9YGR009C BUL1P48524 976 aa4.36□□□□□ -1.71
SEC9YGR009C COQ5P49017 307 aa4.36□□□□□ -1.71
SEC9YGR009C UBC12P52491 188 aa4.36□□□□□ -1.71
SEC9YGR009C MDM34P53083 459 aa4.36□□□□□ -1.71
SEC9YGR009C TIM13P53299 105 aa4.36□□□□□ -1.71
SEC9YGR009C YNL010WP53981 241 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C AIM11P87275 137 aa4.36□□□□□ -1.71
SEC9YGR009C STP1Q00947 519 aa4.36□□□□□ -1.71
SEC9YGR009C YVH1Q02256 364 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C IRC15Q02733 499 aa4.36□□□□□ -1.71
SEC9YGR009C MRX11Q03079 207 aa4.36□□□□□ -1.71
SEC9YGR009C MSS11Q03825 758 aa4.36□□□□□ -1.71
SEC9YGR009C YLR030WQ07967 263 aa4.36□□□□□ -1.71
SEC9YGR009C THI21Q08975 551 aa4.36□□□□□ -1.71
SEC9YGR009C FRE7Q12333 620 aa4.36□□□□□ -1.71
SEC9YGR009C MHT1Q12525 324 aa4.36□□□□□ -1.71
SEC9YGR009C RPL13AQ12690 199 aaPredicted RBP4.36□□□□□ -1.71
SEC9YGR009C NUP159P40477 1460 aa4.36□□□□□ -1.71
SEC9YGR009C TPK3P05986 398 aa4.36□□□□□ -1.71
SEC9YGR009C ATP5P09457 212 aa4.36□□□□□ -1.71
SEC9YGR009C YOL163WP0CF20 169 aa4.36□□□□□ -1.71
SEC9YGR009C PBI2P0CT04 75 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C YER190C-BP0CX94 160 aa4.36□□□□□ -1.71
SEC9YGR009C YEL077W-AP0CX95 160 aa4.36□□□□□ -1.71
SEC9YGR009C YGR296C-BP0CX96 160 aa4.36□□□□□ -1.71
SEC9YGR009C YPL283W-BP0CX97 160 aa4.36□□□□□ -1.71
SEC9YGR009C YPR204C-AP0CX98 160 aa4.36□□□□□ -1.71
SEC9YGR009C TIR1P10863 254 aa4.36□□□□□ -1.71
SEC9YGR009C VAC17P25591 423 aa4.36□□□□□ -1.71
SEC9YGR009C HIS7P33734 552 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C YET1P35723 206 aa4.36□□□□□ -1.71
SEC9YGR009C MBA1P38300 278 aa4.36□□□□□ -1.71
SEC9YGR009C ECM14P38836 430 aa4.36□□□□□ -1.71
SEC9YGR009C MET30P39014 640 aa4.36□□□□□ -1.71
SEC9YGR009C AVT1P47082 602 aa4.36□□□□□ -1.71
SEC9YGR009C MRH4P53166 561 aa4.36□□□□□ -1.71
SEC9YGR009C YNR040WP53736 256 aa4.36□□□□□ -1.71
SEC9YGR009C YLR152CP54072 576 aa4.36□□□□□ -1.71
SEC9YGR009C SRT1Q03175 343 aa4.36□□□□□ -1.71
SEC9YGR009C YDR209CQ03480 137 aa4.36□□□□□ -1.71
SEC9YGR009C YMR087WQ04299 284 aa4.36□□□□□ -1.71
SEC9YGR009C SEN15Q04675 128 aa4.36□□□□□ -1.71
SEC9YGR009C STP3Q05937 343 aa4.36□□□□□ -1.71
SEC9YGR009C SNT309Q06091 175 aaPredicted RBP4.36□□□□□ -1.71
SEC9YGR009C YPR114WQ06107 315 aa4.36□□□□□ -1.71
SEC9YGR009C RDL2Q08742 149 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C RPL7BQ12213 244 aaKnown RBP4.36□□□□□ -1.71
SEC9YGR009C PEX11Q12462 236 aa4.36□□□□□ -1.71
SEC9YGR009C BGL2P15703 313 aaKnown RBP4.35□□□□□ -1.71
SEC9YGR009C HYP2P23301 157 aaKnown RBP4.35□□□□□ -1.71
SEC9YGR009C OAC1P32332 324 aa4.35□□□□□ -1.71
SEC9YGR009C FMT1P32785 401 aa4.35□□□□□ -1.71
SEC9YGR009C BCS1P32839 456 aa4.35□□□□□ -1.71
SEC9YGR009C YBR241CP38142 488 aa4.35□□□□□ -1.71
SEC9YGR009C CPR7P47103 393 aa4.35□□□□□ -1.71
SEC9YGR009C YIP4P53093 235 aa4.35□□□□□ -1.71
SEC9YGR009C YGR151CP53287 111 aa4.35□□□□□ -1.71
SEC9YGR009C MRPL22P53881 309 aa4.35□□□□□ -1.71
SEC9YGR009C GPI15P53961 229 aa4.35□□□□□ -1.71
SEC9YGR009C LEE1Q02799 301 aaKnown RBP4.35□□□□□ -1.71
SEC9YGR009C VBA1Q04301 562 aa4.35□□□□□ -1.71
SEC9YGR009C INM2Q05533 292 aa4.35□□□□□ -1.71
SEC9YGR009C YOL024WQ08172 172 aa4.35□□□□□ -1.71
SEC9YGR009C PST1Q12355 444 aa4.35□□□□□ -1.71
SEC9YGR009C YOR338WQ99326 363 aa4.35□□□□□ -1.71
SEC9YGR009C RPL11AP0C0W9 174 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C BAR1P12630 587 aa4.34□□□□□ -1.71
SEC9YGR009C ANB1P19211 157 aa4.34□□□□□ -1.71
SEC9YGR009C RPB5P20434 215 aa4.34□□□□□ -1.71
SEC9YGR009C POP5P28005 173 aa4.34□□□□□ -1.71
SEC9YGR009C PRE2P30656 287 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C MET22P32179 357 aa4.34□□□□□ -1.71
SEC9YGR009C ECM33P38248 429 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C YBR090CP38253 122 aa4.34□□□□□ -1.71
SEC9YGR009C DBP8P38719 431 aa4.34□□□□□ -1.71
SEC9YGR009C CEM1P39525 442 aa4.34□□□□□ -1.71
SEC9YGR009C TIS11P47977 285 aa4.34□□□□□ -1.71
SEC9YGR009C PRM8P53174 237 aa4.34□□□□□ -1.71
SEC9YGR009C CPR8P53728 308 aa4.34□□□□□ -1.71
SEC9YGR009C YNR048WP53740 393 aa4.34□□□□□ -1.71
SEC9YGR009C PDR17P53844 350 aa4.34□□□□□ -1.71
SEC9YGR009C NUP53Q03790 475 aa4.34□□□□□ -1.71
SEC9YGR009C UPS3Q04006 179 aa4.34□□□□□ -1.71
SEC9YGR009C COQ9Q05779 260 aa4.34□□□□□ -1.71
SEC9YGR009C HEM25Q07534 307 aa4.34□□□□□ -1.71
SEC9YGR009C MCP1Q12106 302 aa4.34□□□□□ -1.71
SEC9YGR009C PRR2Q12310 699 aa4.34□□□□□ -1.71
SEC9YGR009C ICT1Q12385 394 aa4.34□□□□□ -1.71
SEC9YGR009C RPL11BQ3E757 174 aaPredicted RBP4.34□□□□□ -1.71
SEC9YGR009C RPL14BP38754 138 aaKnown RBP4.34□□□□□ -1.71
SEC9YGR009C TRR2P38816 342 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms