RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeastyeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP3YER151C MDM32Q12171 622 aa0.73□□□□□ -2.29
UBP3YER151C YOR114WQ12219 294 aa0.73□□□□□ -2.29
UBP3YER151C YDL012CQ12489 107 aa0.73□□□□□ -2.29
UBP3YER151C NOT5Q12514 560 aaPredicted RBP0.73□□□□□ -2.29
UBP3YER151C YOL159C-AQ3E769 90 aa0.73□□□□□ -2.29
UBP3YER151C COX5AP00424 153 aa0.73□□□□□ -2.29
UBP3YER151C ATR1P13090 542 aa0.73□□□□□ -2.29
UBP3YER151C SEN2P16658 377 aa0.73□□□□□ -2.29
UBP3YER151C SEC22P22214 214 aa0.73□□□□□ -2.29
UBP3YER151C DBF4P32325 704 aa0.73□□□□□ -2.29
UBP3YER151C CAB3P36076 571 aa0.73□□□□□ -2.29
UBP3YER151C RIB1P38066 345 aa0.73□□□□□ -2.29
UBP3YER151C ATG7P38862 630 aa0.73□□□□□ -2.29
UBP3YER151C NPT1P39683 429 aaKnown RBP0.73□□□□□ -2.29
UBP3YER151C YJR011CP47086 261 aaPredicted RBP0.73□□□□□ -2.29
UBP3YER151C SSN8P47821 323 aa0.73□□□□□ -2.29
UBP3YER151C YNL033WP53964 284 aa0.73□□□□□ -2.29
UBP3YER151C YNL019CP53975 284 aa0.73□□□□□ -2.29
UBP3YER151C RSN1Q03516 953 aa0.73□□□□□ -2.29
UBP3YER151C YMR209CQ03648 457 aa0.73□□□□□ -2.29
UBP3YER151C YDR124WQ04608 324 aa0.73□□□□□ -2.29
UBP3YER151C VPS74Q06385 345 aa0.73□□□□□ -2.29
UBP3YER151C NAT3Q06504 195 aa0.73□□□□□ -2.29
UBP3YER151C CCW12Q12127 133 aa0.73□□□□□ -2.29
UBP3YER151C YPL119C-AQ3E751 87 aa0.73□□□□□ -2.29
UBP3YER151C FAB1P34756 2278 aa0.72□□□□□ -2.29
UBP3YER151C RPS11AP0CX47 156 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C RPS11BP0CX48 156 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C GCD2P12754 651 aaPredicted RBP0.72□□□□□ -2.29
UBP3YER151C MET16P18408 261 aaPredicted RBP0.72□□□□□ -2.29
UBP3YER151C PRS1P32895 427 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C CLB6P32943 380 aa0.72□□□□□ -2.29
UBP3YER151C UBC6P33296 250 aaPredicted RBP0.72□□□□□ -2.29
UBP3YER151C ECM14P38836 430 aa0.72□□□□□ -2.29
UBP3YER151C OST1P41543 476 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C RNH201P53942 307 aa0.72□□□□□ -2.29
UBP3YER151C HAL1Q01766 294 aa0.72□□□□□ -2.29
UBP3YER151C MEH1Q02205 184 aa0.72□□□□□ -2.29
UBP3YER151C MRP51Q02950 344 aa0.72□□□□□ -2.29
UBP3YER151C SGF11Q03067 99 aa0.72□□□□□ -2.29
UBP3YER151C MIX17Q03667 156 aa0.72□□□□□ -2.29
UBP3YER151C TSA2Q04120 196 aa0.72□□□□□ -2.29
UBP3YER151C ATG10Q07879 167 aa0.72□□□□□ -2.29
UBP3YER151C VAM3Q12241 283 aa0.72□□□□□ -2.29
UBP3YER151C RBD2Q12270 262 aa0.72□□□□□ -2.29
UBP3YER151C YDL007C-AQ2V2Q0 85 aa0.72□□□□□ -2.29
UBP3YER151C YJR112W-AQ3E743 109 aa0.72□□□□□ -2.29
UBP3YER151C YBL112CQ3E7Y4 105 aa0.72□□□□□ -2.29
UBP3YER151C CYC3P06182 269 aa0.72□□□□□ -2.29
UBP3YER151C YSF3P0C074 85 aaPredicted RBP0.72□□□□□ -2.29
UBP3YER151C CPR1P14832 162 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C HEM15P16622 393 aa0.72□□□□□ -2.29
UBP3YER151C MRPS28P21771 286 aa0.72□□□□□ -2.29
UBP3YER151C MRPL20P22354 195 aaPredicted RBP0.72□□□□□ -2.29
UBP3YER151C DBR1P24309 405 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C ATP7P30902 174 aa0.72□□□□□ -2.29
UBP3YER151C YUH1P35127 236 aa0.72□□□□□ -2.29
UBP3YER151C YCR041WP37265 110 aa0.72□□□□□ -2.29
UBP3YER151C YBL029WP38201 376 aa0.72□□□□□ -2.29
UBP3YER151C YPC1P38298 316 aa0.72□□□□□ -2.29
UBP3YER151C MSG5P38590 489 aa0.72□□□□□ -2.29
UBP3YER151C GRE3P38715 327 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
UBP3YER151C TRM5P38793 499 aa0.72□□□□□ -2.29
UBP3YER151C YIP1P53039 248 aa0.72□□□□□ -2.29
UBP3YER151C GPI1P53306 609 aa0.72□□□□□ -2.29
UBP3YER151C SDC1Q03323 175 aa0.72□□□□□ -2.29
UBP3YER151C LIP2Q06005 328 aa0.72□□□□□ -2.29
UBP3YER151C SEC10Q06245 871 aa0.72□□□□□ -2.29
UBP3YER151C MRX9Q07349 420 aaKnown RBP0.72□□□□□ -2.29
UBP3YER151C ATG31Q12421 196 aa0.72□□□□□ -2.29
UBP3YER151C MET17P06106 444 aa0.71□□□□□ -2.3
UBP3YER151C RPL31BP0C2H9 113 aaKnown RBP0.71□□□□□ -2.3
UBP3YER151C YHR213WP0CI67 198 aa0.71□□□□□ -2.3
UBP3YER151C ARF2P19146 181 aaKnown RBP0.71□□□□□ -2.3
UBP3YER151C RAD57P25301 460 aa0.71□□□□□ -2.3
UBP3YER151C CPR4P25334 318 aa0.71□□□□□ -2.3
UBP3YER151C RRP7P25368 297 aaPredicted RBP0.71□□□□□ -2.3
UBP3YER151C FUN26P31381 517 aa0.71□□□□□ -2.3
UBP3YER151C SEC17P32602 292 aa0.71□□□□□ -2.3
UBP3YER151C YEL045CP32616 141 aa0.71□□□□□ -2.3
UBP3YER151C MDL1P33310 695 aa0.71□□□□□ -2.3
UBP3YER151C RRP1P35178 278 aaPredicted RBP0.71□□□□□ -2.3
UBP3YER151C ISC1P40015 477 aaKnown RBP0.71□□□□□ -2.3
UBP3YER151C YIL054WP40524 105 aa0.71□□□□□ -2.3
UBP3YER151C APQ12P40532 138 aa0.71□□□□□ -2.3
UBP3YER151C YFL019CP43576 117 aa0.71□□□□□ -2.3
UBP3YER151C OKP1P53298 406 aa0.71□□□□□ -2.3
UBP3YER151C NOP19P53317 196 aaPredicted RBP0.71□□□□□ -2.3
UBP3YER151C BIO4P53630 237 aa0.71□□□□□ -2.3
UBP3YER151C YNL260CP53846 198 aa0.71□□□□□ -2.3
UBP3YER151C YLR152CP54072 576 aa0.71□□□□□ -2.3
UBP3YER151C VPS71Q03433 280 aa0.71□□□□□ -2.3
UBP3YER151C DYN3Q04949 312 aa0.71□□□□□ -2.3
UBP3YER151C SWC7Q06707 132 aa0.71□□□□□ -2.3
UBP3YER151C MSA1Q08471 629 aa0.71□□□□□ -2.3
UBP3YER151C NCA2Q12374 616 aa0.71□□□□□ -2.3
UBP3YER151C YNL146C-AQ3E7Z1 64 aa0.71□□□□□ -2.3
UBP3YER151C STE2D6VTK4 431 aa0.71□□□□□ -2.3
UBP3YER151C HSP82P02829 709 aaKnown RBP0.71□□□□□ -2.3
UBP3YER151C ARG80P07249 177 aa0.71□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms