RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C PST1Q12355 444 aa0.99□□□□□ -2.25
SWI4YER111C HSP26P15992 214 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25 RIP-Chip
SWI4YER111C HOM6P31116 359 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C MGM101P32787 269 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C MRPL27P36526 146 aaPredicted RBP0.99□□□□□ -2.25
SWI4YER111C NPT1P39683 429 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C PRE5P40302 234 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C PRE6P40303 254 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C RFC4P40339 323 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C DSN1P40568 576 aa0.99□□□□□ -2.25
SWI4YER111C ALG13P53178 202 aa0.99□□□□□ -2.25
SWI4YER111C CDC123Q05791 360 aa0.99□□□□□ -2.25
SWI4YER111C SPO77Q06134 477 aa0.99□□□□□ -2.25
SWI4YER111C RRP40Q08285 240 aaKnown RBP0.99□□□□□ -2.25
SWI4YER111C YPS3Q12303 508 aa0.99□□□□□ -2.25
SWI4YER111C IES3Q12345 250 aa0.99□□□□□ -2.25
SWI4YER111C TRM10Q12400 293 aa0.99□□□□□ -2.25
SWI4YER111C ADH1P00330 348 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C COX5AP00424 153 aa0.98□□□□□ -2.25
SWI4YER111C DBP7P36120 742 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C ERG28P40030 148 aa0.98□□□□□ -2.25
SWI4YER111C YJR079WP47126 109 aa0.98□□□□□ -2.25
SWI4YER111C JHD2P47156 728 aaPredicted RBP0.98□□□□□ -2.25
SWI4YER111C TRM9P49957 279 aa0.98□□□□□ -2.25
SWI4YER111C FYV6P53913 173 aa0.98□□□□□ -2.25
SWI4YER111C TLG2Q08144 397 aa0.98□□□□□ -2.25
SWI4YER111C GET4Q12125 312 aa0.98□□□□□ -2.25
SWI4YER111C DFM1Q12743 341 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C YKL183C-AQ3E765 70 aa0.98□□□□□ -2.25
SWI4YER111C YDR157WA0A023PZE8 133 aa0.98□□□□□ -2.25
SWI4YER111C HTB1P02293 131 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C HTB2P02294 131 aa0.98□□□□□ -2.25
SWI4YER111C COX10P21592 462 aa0.98□□□□□ -2.25
SWI4YER111C ARN2P38724 620 aa0.98□□□□□ -2.25
SWI4YER111C TRM5P38793 499 aa0.98□□□□□ -2.25
SWI4YER111C BDH1P39714 382 aa0.98□□□□□ -2.25
SWI4YER111C ADO1P47143 340 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C COQ5P49017 307 aa0.98□□□□□ -2.25
SWI4YER111C SPG4Q04438 115 aa0.98□□□□□ -2.25
SWI4YER111C CSM4Q08955 156 aa0.98□□□□□ -2.25
SWI4YER111C YPR011CQ12251 326 aa0.98□□□□□ -2.25
SWI4YER111C JLP1Q12358 412 aa0.98□□□□□ -2.25
SWI4YER111C YAL063C-AQ3E791 96 aa0.98□□□□□ -2.25
SWI4YER111C LYS2P07702 1392 aa0.98□□□□□ -2.25
SWI4YER111C ROM2P51862 1356 aaKnown RBP0.98□□□□□ -2.25
SWI4YER111C SWI1P09547 1314 aa0.98□□□□□ -2.25
SWI4YER111C CBP6P07253 162 aaPredicted RBP0.98□□□□□ -2.25
SWI4YER111C MRPS9P38120 278 aa0.98□□□□□ -2.25
SWI4YER111C SYS1P41544 203 aa0.98□□□□□ -2.25
SWI4YER111C UFE1P41834 346 aa0.98□□□□□ -2.25
SWI4YER111C YLR152CP54072 576 aa0.98□□□□□ -2.25
SWI4YER111C YMR166CQ03829 368 aa0.98□□□□□ -2.25
SWI4YER111C YOL019WQ08157 551 aa0.98□□□□□ -2.25
SWI4YER111C CLP1Q08685 445 aaPredicted RBP0.98□□□□□ -2.25
SWI4YER111C YPL264CQ08980 353 aa0.98□□□□□ -2.25
SWI4YER111C DYN1P36022 4092 aa0.98□□□□□ -2.25
SWI4YER111C CPT1P17898 393 aa0.97□□□□□ -2.25
SWI4YER111C PHO80P20052 293 aa0.97□□□□□ -2.25
SWI4YER111C RPS5P26783 225 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C PRY2P36110 329 aa0.97□□□□□ -2.25
SWI4YER111C HMT1P38074 348 aa0.97□□□□□ -2.25
SWI4YER111C YBR096WP38256 230 aa0.97□□□□□ -2.25
SWI4YER111C RRG9P40156 214 aa0.97□□□□□ -2.25
SWI4YER111C PGU1P47180 361 aa0.97□□□□□ -2.25
SWI4YER111C CWC23P52868 283 aaPredicted RBP0.97□□□□□ -2.25
SWI4YER111C RSM27P53305 110 aa0.97□□□□□ -2.25
SWI4YER111C YPL039WQ03080 316 aa0.97□□□□□ -2.25
SWI4YER111C MRPS17Q03246 237 aaPredicted RBP0.97□□□□□ -2.25
SWI4YER111C ECM11Q04110 302 aa0.97□□□□□ -2.25
SWI4YER111C DXO1Q06349 442 aa0.97□□□□□ -2.25
SWI4YER111C IPP1P00817 287 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C LDB16P25587 256 aa0.97□□□□□ -2.25
SWI4YER111C YCR102CP25608 368 aa0.97□□□□□ -2.25
SWI4YER111C GDH2P33327 1092 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C GOS1P38736 223 aa0.97□□□□□ -2.25
SWI4YER111C YRB2P40517 327 aa0.97□□□□□ -2.25
SWI4YER111C ECO1P43605 281 aa0.97□□□□□ -2.25
SWI4YER111C RPC17P47076 161 aa0.97□□□□□ -2.25
SWI4YER111C NUP57P48837 541 aa0.97□□□□□ -2.25
SWI4YER111C NBP35P52920 328 aa0.97□□□□□ -2.25
SWI4YER111C HOP2P53187 214 aa0.97□□□□□ -2.25
SWI4YER111C GTR2P53290 341 aa0.97□□□□□ -2.25
SWI4YER111C CUS2P53830 285 aaPredicted RBP0.97□□□□□ -2.25
SWI4YER111C SDC1Q03323 175 aa0.97□□□□□ -2.25
SWI4YER111C ECM19Q06011 112 aa0.97□□□□□ -2.25
SWI4YER111C COQ10Q08058 207 aa0.97□□□□□ -2.25
SWI4YER111C DUR1,2P32528 1835 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C YRB1P41920 201 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C YJL028WP47062 111 aa0.97□□□□□ -2.25
SWI4YER111C MIG2P53035 382 aa0.97□□□□□ -2.25
SWI4YER111C FLC3P53121 802 aa0.97□□□□□ -2.25
SWI4YER111C GIS2P53849 153 aaKnown RBP RIP-Chip data0.97□□□□□ -2.25not detected
SWI4YER111C ALG9P53868 555 aaKnown RBP0.97□□□□□ -2.25
SWI4YER111C AAH1P53909 347 aa0.97□□□□□ -2.25
SWI4YER111C YDR124WQ04608 324 aa0.97□□□□□ -2.25
SWI4YER111C YAK1P14680 807 aa0.96□□□□□ -2.26
SWI4YER111C URA6P15700 204 aa0.96□□□□□ -2.26
SWI4YER111C DBF2P22204 572 aa0.96□□□□□ -2.26
SWI4YER111C RPB9P27999 122 aa0.96□□□□□ -2.26
SWI4YER111C RNP1P32385 249 aa0.96□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms