RNA–Protein interactions for RNA: YER086W

ILV1, Transcript of Threonine deaminase, catalyzes first step in isoleucine biosynthesis, yeast

Gene ILV1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ILV1	YER086W	HTZ1	Q12692	134 aa	Known RBP	5.4	□□□□□ -1.55
ILV1	YER086W	YBL029C-A	Q3E756	94 aa		5.4	□□□□□ -1.55
ILV1	YER086W	DIF1	O13577	133 aa		5.39	□□□□□ -1.55
ILV1	YER086W	PCL1	P24867	279 aa		5.39	□□□□□ -1.55
ILV1	YER086W	ATG15	P25641	520 aa		5.39	□□□□□ -1.55
ILV1	YER086W	MRP20	P32387	263 aa		5.39	□□□□□ -1.55
ILV1	YER086W	PPZ2	P33329	710 aa		5.39	□□□□□ -1.55
ILV1	YER086W	AVT7	P40501	490 aa		5.39	□□□□□ -1.55
ILV1	YER086W	OTU1	P43558	301 aa		5.39	□□□□□ -1.55
ILV1	YER086W	BXI1	P48558	297 aa		5.39	□□□□□ -1.55
ILV1	YER086W	DIE2	P50076	525 aa		5.39	□□□□□ -1.55
ILV1	YER086W	RNH201	P53942	307 aa		5.39	□□□□□ -1.55
ILV1	YER086W	SUR7	P54003	302 aa		5.39	□□□□□ -1.55
ILV1	YER086W	BUD25	P85052	153 aa		5.39	□□□□□ -1.55
ILV1	YER086W	SRL2	Q12020	392 aa		5.39	□□□□□ -1.55
ILV1	YER086W	COX17	Q12287	69 aa		5.39	□□□□□ -1.55
ILV1	YER086W	FSH3	Q99369	266 aa		5.39	□□□□□ -1.55
ILV1	YER086W	COX5B	P00425	151 aa		5.38	□□□□□ -1.55
ILV1	YER086W	PHO2	P07269	559 aa		5.38	□□□□□ -1.55
ILV1	YER086W	SGA1	P08019	549 aa		5.38	□□□□□ -1.55
ILV1	YER086W	HXT2	P23585	541 aa		5.38	□□□□□ -1.55
ILV1	YER086W	RNP1	P32385	249 aa		5.38	□□□□□ -1.55
ILV1	YER086W	ARO4	P32449	370 aa	Known RBP	5.38	□□□□□ -1.55
ILV1	YER086W	CIN2	P46670	268 aa		5.38	□□□□□ -1.55
ILV1	YER086W	PHB2	P50085	310 aa		5.38	□□□□□ -1.55
ILV1	YER086W	YGL159W	P53110	370 aa		5.38	□□□□□ -1.55
ILV1	YER086W	YGR042W	P53227	271 aa		5.38	□□□□□ -1.55
ILV1	YER086W	YNR048W	P53740	393 aa		5.38	□□□□□ -1.55
ILV1	YER086W	YNR071C	P53757	342 aa		5.38	□□□□□ -1.55
ILV1	YER086W	MRP51	Q02950	344 aa		5.38	□□□□□ -1.55
ILV1	YER086W	TY1A-DR2	Q03964	440 aa	Known RBP	5.38	□□□□□ -1.55
ILV1	YER086W	YDR391C	Q04170	232 aa		5.38	□□□□□ -1.55
ILV1	YER086W	HNT1	Q04344	158 aa	Known RBP	5.38	□□□□□ -1.55
ILV1	YER086W	YPL272C	Q08984	517 aa		5.38	□□□□□ -1.55
ILV1	YER086W	ODC2	Q99297	307 aa		5.38	□□□□□ -1.55
ILV1	YER086W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
ILV1	YER086W	URA3	P03962	267 aa		5.37	□□□□□ -1.55
ILV1	YER086W	URA6	P15700	204 aa		5.37	□□□□□ -1.55
ILV1	YER086W	YCP4	P25349	247 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	ERV1	P27882	189 aa		5.37	□□□□□ -1.55
ILV1	YER086W	UTP30	P36144	274 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	MRPL27	P36526	146 aa	Predicted RBP	5.37	□□□□□ -1.55
ILV1	YER086W	APL3	P38065	1025 aa		5.37	□□□□□ -1.55
ILV1	YER086W	TCM62	P38228	572 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	UMP1	P38293	148 aa		5.37	□□□□□ -1.55
ILV1	YER086W	LSM1	P47017	172 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	NSA1	P53136	463 aa	Predicted RBP	5.37	□□□□□ -1.55
ILV1	YER086W	RPL6A	Q02326	176 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	RAF1	Q06891	181 aa		5.37	□□□□□ -1.55
ILV1	YER086W	CDC39	P25655	2108 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	YLR302C	O13544	120 aa		5.37	□□□□□ -1.55
ILV1	YER086W	RAD52	P06778	471 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	RPL30	P14120	105 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	RNA14	P25298	677 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	XBP1	P40489	647 aa		5.37	□□□□□ -1.55
ILV1	YER086W	YGL260W	P53056	76 aa		5.37	□□□□□ -1.55
ILV1	YER086W	RCE1	Q03530	315 aa		5.37	□□□□□ -1.55
ILV1	YER086W	ECM18	Q04623	453 aa		5.37	□□□□□ -1.55
ILV1	YER086W	YLR283W	Q05867	314 aa		5.37	□□□□□ -1.55
ILV1	YER086W	MRX9	Q07349	420 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	THI72	Q08579	599 aa		5.37	□□□□□ -1.55
ILV1	YER086W	USB1	Q12208	290 aa	Known RBP	5.37	□□□□□ -1.55
ILV1	YER086W	TDH2	P00358	332 aa	Known RBP	5.36	□□□□□ -1.55
ILV1	YER086W	ARG80	P07249	177 aa		5.36	□□□□□ -1.55
ILV1	YER086W	DSF1	P0CX08	502 aa		5.36	□□□□□ -1.55
ILV1	YER086W	YNR073C	P0CX09	502 aa		5.36	□□□□□ -1.55
ILV1	YER086W	GRX2	P17695	143 aa	Known RBP	5.36	□□□□□ -1.55
ILV1	YER086W	SAR1	P20606	190 aa	Known RBP	5.36	□□□□□ -1.55
ILV1	YER086W	RFA3	P26755	122 aa	Known RBP	5.36	□□□□□ -1.55
ILV1	YER086W	HMX1	P32339	317 aa		5.36	□□□□□ -1.55
ILV1	YER086W	MRPS5	P33759	307 aa		5.36	□□□□□ -1.55
ILV1	YER086W	YER084W	P40057	128 aa		5.36	□□□□□ -1.55
ILV1	YER086W	IDP2	P41939	412 aa		5.36	□□□□□ -1.55
ILV1	YER086W	API2	Q04413	109 aa		5.36	□□□□□ -1.55
ILV1	YER086W	YDL218W	Q07629	317 aa		5.36	□□□□□ -1.55
ILV1	YER086W	YLR031W	Q07978	186 aa		5.36	□□□□□ -1.55
ILV1	YER086W	RFU1	Q08003	200 aa		5.36	□□□□□ -1.55
ILV1	YER086W	AAC1	P04710	309 aa		5.35	□□□□□ -1.55
ILV1	YER086W	HEM4	P06174	275 aa		5.35	□□□□□ -1.55
ILV1	YER086W	CPR4	P25334	318 aa		5.35	□□□□□ -1.55
ILV1	YER086W	VMA5	P31412	392 aa	Known RBP	5.35	□□□□□ -1.55
ILV1	YER086W	FMT1	P32785	401 aa		5.35	□□□□□ -1.55
ILV1	YER086W	REC114	P32841	428 aa		5.35	□□□□□ -1.55
ILV1	YER086W	TIF11	P38912	153 aa	Known RBP	5.35	□□□□□ -1.55
ILV1	YER086W	MOB2	P43563	287 aa		5.35	□□□□□ -1.55
ILV1	YER086W	YJL016W	P47072	561 aa		5.35	□□□□□ -1.55
ILV1	YER086W	AVT4	P50944	713 aa		5.35	□□□□□ -1.55
ILV1	YER086W	GIM3	P53900	129 aa		5.35	□□□□□ -1.55
ILV1	YER086W	SMX3	P54999	86 aa	Predicted RBP	5.35	□□□□□ -1.55
ILV1	YER086W	YBR056W-A	I2HB52	66 aa		5.34	□□□□□ -1.55
ILV1	YER086W	CDC28	P00546	298 aa	Known RBP	5.34	□□□□□ -1.55
ILV1	YER086W	RPL6B	P05739	176 aa	Known RBP	5.34	□□□□□ -1.55
ILV1	YER086W	PUT1	P09368	476 aa		5.34	□□□□□ -1.55
ILV1	YER086W	IFM1	P25038	676 aa		5.34	□□□□□ -1.55
ILV1	YER086W	PEX4	P29340	183 aa		5.34	□□□□□ -1.55
ILV1	YER086W	DEG1	P31115	442 aa	Known RBP	5.34	□□□□□ -1.55
ILV1	YER086W	MTC7	P32633	139 aa		5.34	□□□□□ -1.55
ILV1	YER086W	ARC40	P38328	384 aa	Known RBP	5.34	□□□□□ -1.55
ILV1	YER086W	YND1	P40009	630 aa		5.34	□□□□□ -1.55
ILV1	YER086W	YIP5	P53108	310 aa		5.34	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms