RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	SEC16	P48415	2195 aa	Known RBP	4.05	□□□□□ -1.76
APC4	YDR118W	YLR358C	O13565	187 aa		4.04	□□□□□ -1.76
APC4	YDR118W	RAD52	P06778	471 aa	Known RBP	4.04	□□□□□ -1.76
APC4	YDR118W	CHO1	P08456	276 aa		4.04	□□□□□ -1.76
APC4	YDR118W	GRX2	P17695	143 aa	Known RBP	4.04	□□□□□ -1.76
APC4	YDR118W	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
APC4	YDR118W	MTC7	P32633	139 aa		4.04	□□□□□ -1.76
APC4	YDR118W	YIL060W	P40519	144 aa		4.04	□□□□□ -1.76
APC4	YDR118W	OTU1	P43558	301 aa		4.04	□□□□□ -1.76
APC4	YDR118W	NCE103	P53615	221 aa		4.04	□□□□□ -1.76
APC4	YDR118W	TY1A-DR2	Q03964	440 aa	Known RBP	4.04	□□□□□ -1.76
APC4	YDR118W	RAF1	Q06891	181 aa		4.04	□□□□□ -1.76
APC4	YDR118W	THI72	Q08579	599 aa		4.04	□□□□□ -1.76
APC4	YDR118W	SRL2	Q12020	392 aa		4.04	□□□□□ -1.76
APC4	YDR118W	ISN1	Q99312	450 aa		4.04	□□□□□ -1.76
APC4	YDR118W	PHO2	P07269	559 aa		4.03	□□□□□ -1.76
APC4	YDR118W	DSF1	P0CX08	502 aa		4.03	□□□□□ -1.76
APC4	YDR118W	YNR073C	P0CX09	502 aa		4.03	□□□□□ -1.76
APC4	YDR118W	CDC23	P16522	626 aa		4.03	□□□□□ -1.76
APC4	YDR118W	SAR1	P20606	190 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	RNA14	P25298	677 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	DAL80	P26343	269 aa		4.03	□□□□□ -1.76
APC4	YDR118W	ARO4	P32449	370 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	MRPS5	P33759	307 aa		4.03	□□□□□ -1.76
APC4	YDR118W	CLG1	P35190	452 aa		4.03	□□□□□ -1.76
APC4	YDR118W	APL3	P38065	1025 aa		4.03	□□□□□ -1.76
APC4	YDR118W	UMP1	P38293	148 aa		4.03	□□□□□ -1.76
APC4	YDR118W	AVT7	P40501	490 aa		4.03	□□□□□ -1.76
APC4	YDR118W	PHB2	P50085	310 aa		4.03	□□□□□ -1.76
APC4	YDR118W	YGL159W	P53110	370 aa		4.03	□□□□□ -1.76
APC4	YDR118W	YNR048W	P53740	393 aa		4.03	□□□□□ -1.76
APC4	YDR118W	YNR071C	P53757	342 aa		4.03	□□□□□ -1.76
APC4	YDR118W	ERV25	P54837	211 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	HNT1	Q04344	158 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	DPB4	Q04603	196 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	DIF1	O13577	133 aa		4.03	□□□□□ -1.76
APC4	YDR118W	TDH2	P00358	332 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
APC4	YDR118W	RPL30	P14120	105 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	RPL3	P14126	387 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	URA6	P15700	204 aa		4.03	□□□□□ -1.76
APC4	YDR118W	ATG15	P25641	520 aa		4.03	□□□□□ -1.76
APC4	YDR118W	MSS1	P32559	526 aa	Predicted RBP	4.03	□□□□□ -1.76
APC4	YDR118W	YBL010C	P32788	280 aa		4.03	□□□□□ -1.76
APC4	YDR118W	PPZ2	P33329	710 aa		4.03	□□□□□ -1.76
APC4	YDR118W	TCM62	P38228	572 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	YMR262W	P38430	313 aa		4.03	□□□□□ -1.76
APC4	YDR118W	XBP1	P40489	647 aa		4.03	□□□□□ -1.76
APC4	YDR118W	IDP2	P41939	412 aa		4.03	□□□□□ -1.76
APC4	YDR118W	AVT4	P50944	713 aa		4.03	□□□□□ -1.76
APC4	YDR118W	NGL2	Q03264	515 aa	Known RBP	4.03	□□□□□ -1.76
APC4	YDR118W	RCE1	Q03530	315 aa		4.03	□□□□□ -1.76
APC4	YDR118W	MET32	Q12041	191 aa		4.03	□□□□□ -1.76
APC4	YDR118W	RDI1	Q12434	202 aa		4.03	□□□□□ -1.76
APC4	YDR118W	FOL3	Q12676	427 aa	Predicted RBP	4.03	□□□□□ -1.76
APC4	YDR118W	HEM4	P06174	275 aa		4.02	□□□□□ -1.77
APC4	YDR118W	NHP6B	P11633	99 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	UTP30	P36144	274 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	YER084W	P40057	128 aa		4.02	□□□□□ -1.77
APC4	YDR118W	GIM3	P53900	129 aa		4.02	□□□□□ -1.77
APC4	YDR118W	HHT1	P61830	136 aa		4.02	□□□□□ -1.77
APC4	YDR118W	ACS1	Q01574	713 aa		4.02	□□□□□ -1.77
APC4	YDR118W	RPL6A	Q02326	176 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	FSH3	Q99369	266 aa		4.02	□□□□□ -1.77
APC4	YDR118W	YBR056W-A	I2HB52	66 aa		4.02	□□□□□ -1.77
APC4	YDR118W	RPL6B	P05739	176 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	VMA5	P31412	392 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	YND1	P40009	630 aa		4.02	□□□□□ -1.77
APC4	YDR118W	MOB2	P43563	287 aa		4.02	□□□□□ -1.77
APC4	YDR118W	NSA1	P53136	463 aa	Predicted RBP	4.02	□□□□□ -1.77
APC4	YDR118W	YGR045C	P53229	120 aa		4.02	□□□□□ -1.77
APC4	YDR118W	RSM27	P53305	110 aa		4.02	□□□□□ -1.77
APC4	YDR118W	ARG5,6	Q01217	863 aa		4.02	□□□□□ -1.77
APC4	YDR118W	VBA1	Q04301	562 aa		4.02	□□□□□ -1.77
APC4	YDR118W	MRX9	Q07349	420 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	FIT3	Q08907	204 aa		4.02	□□□□□ -1.77
APC4	YDR118W	YOR385W	Q08909	290 aa		4.02	□□□□□ -1.77
APC4	YDR118W	USB1	Q12208	290 aa	Known RBP	4.02	□□□□□ -1.77
APC4	YDR118W	IPP1	P00817	287 aa	Known RBP	4.01	□□□□□ -1.77
APC4	YDR118W	ARO3	P14843	370 aa	Known RBP	4.01	□□□□□ -1.77
APC4	YDR118W	RFA3	P26755	122 aa	Known RBP	4.01	□□□□□ -1.77
APC4	YDR118W	MRP20	P32387	263 aa		4.01	□□□□□ -1.77
APC4	YDR118W	YKL063C	P35725	167 aa		4.01	□□□□□ -1.77
APC4	YDR118W	PTI1	P39927	425 aa	Predicted RBP	4.01	□□□□□ -1.77
APC4	YDR118W	STP4	Q07351	490 aa		4.01	□□□□□ -1.77
APC4	YDR118W	RFU1	Q08003	200 aa		4.01	□□□□□ -1.77
APC4	YDR118W	PRS5	Q12265	496 aa	Known RBP	4.01	□□□□□ -1.77
APC4	YDR118W	RPL35A	P0CX84	120 aa	Known RBP	4	□□□□□ -1.77
APC4	YDR118W	RPL35B	P0CX85	120 aa	Known RBP	4	□□□□□ -1.77
APC4	YDR118W	HNM1	P19807	563 aa		4	□□□□□ -1.77
APC4	YDR118W	DIT1	P21623	536 aa		4	□□□□□ -1.77
APC4	YDR118W	DEG1	P31115	442 aa	Known RBP	4	□□□□□ -1.77
APC4	YDR118W	VAM7	P32912	316 aa		4	□□□□□ -1.77
APC4	YDR118W	MCH2	P36032	473 aa		4	□□□□□ -1.77
APC4	YDR118W	MRPL27	P36526	146 aa	Predicted RBP	4	□□□□□ -1.77
APC4	YDR118W	ADH5	P38113	351 aa	Known RBP	4	□□□□□ -1.77
APC4	YDR118W	VMA22	P38784	181 aa		4	□□□□□ -1.77
APC4	YDR118W	FLX1	P40464	311 aa		4	□□□□□ -1.77
APC4	YDR118W	LSM1	P47017	172 aa	Known RBP	4	□□□□□ -1.77
APC4	YDR118W	SIP18	P50263	79 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms