RNA–Protein interactions for RNA: YDL128W

VCX1, Transcript of Vacuolar membrane antiporter with Ca2+/H+ and K+/H+ exchange activity, yeast

Gene VCX1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VCX1	YDL128W	RTK1	Q12100	620 aa	Predicted RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	TMA7	Q3E764	64 aa	Known RBP	4.97	□□□□□ -1.61
VCX1	YDL128W	PET20	Q99373	253 aa		4.97	□□□□□ -1.61
VCX1	YDL128W	GAL4	P04386	881 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	RIP1	P08067	215 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	PAU19	P0CE85	124 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	PAU21	P0CE86	164 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	PAU22	P0CE87	164 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	URA6	P15700	204 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	STE4	P18851	423 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	ERG4	P25340	473 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	PET18	P25362	215 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	PAU3	P25610	124 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	TRR1	P29509	319 aa	Known RBP	4.96	□□□□□ -1.62
VCX1	YDL128W	SUI1	P32911	108 aa	Known RBP	4.96	□□□□□ -1.62
VCX1	YDL128W	GMH1	P36125	273 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	IML3	P38265	245 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	YER010C	P40011	234 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	JHD1	P40034	492 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	YER158C	P40095	573 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	OST3	P48439	350 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	TOS2	P50078	622 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	RSM23	Q01163	450 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	RUB1	Q03919	77 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	HNT1	Q04344	158 aa	Known RBP	4.96	□□□□□ -1.62
VCX1	YDL128W	GMC1	Q04399	608 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	SEC13	Q04491	297 aa	Known RBP	4.96	□□□□□ -1.62
VCX1	YDL128W	NAT4	Q04751	285 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	RTN1	Q04947	295 aa	Known RBP	4.96	□□□□□ -1.62
VCX1	YDL128W	YPR064W	Q12492	139 aa		4.96	□□□□□ -1.62
VCX1	YDL128W	HNM1	P19807	563 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	STP22	P25604	385 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	ATG15	P25641	520 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	KKQ8	P36004	724 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	ECM34	P38728	170 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	YEA6	P39953	335 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	IKS1	P47042	667 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	GPI14	P47088	403 aa	Known RBP	4.95	□□□□□ -1.62
VCX1	YDL128W	BNS1	P50084	137 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	YAP1802	P53309	568 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	MTM1	P53320	366 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	PRM1	P53835	661 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	YMR206W	Q03695	313 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	CAB5	Q03941	241 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	SNO4	Q04902	237 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	ERP1	Q05359	219 aa	Known RBP	4.95	□□□□□ -1.62
VCX1	YDL128W	SNT309	Q06091	175 aa	Predicted RBP	4.95	□□□□□ -1.62
VCX1	YDL128W	FRQ1	Q06389	190 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	SYM1	Q06563	197 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	HSP33	Q08914	237 aa	Known RBP	4.95	□□□□□ -1.62
VCX1	YDL128W	HSP32	Q08992	237 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	YDL211C	Q12121	372 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	POM33	Q12164	279 aa		4.95	□□□□□ -1.62
VCX1	YDL128W	RPS21B	Q3E754	87 aa	Known RBP	4.95	□□□□□ -1.62
VCX1	YDL128W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
VCX1	YDL128W	CBS1	P14066	229 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	YMR262W	P38430	313 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	WSS1	P38838	269 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	GIM4	P40005	111 aa	Known RBP	4.94	□□□□□ -1.62
VCX1	YDL128W	IRC22	P40006	225 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	FMP10	P40098	244 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	RPL13B	P40212	199 aa	Known RBP	4.94	□□□□□ -1.62
VCX1	YDL128W	PHS1	P40857	217 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	CCC1	P47818	322 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	CDH1	P53197	566 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	YML018C	Q03730	393 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	XYL2	Q07993	356 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	ORT1	Q12375	292 aa		4.94	□□□□□ -1.62
VCX1	YDL128W	RPL13A	Q12690	199 aa	Predicted RBP	4.94	□□□□□ -1.62
VCX1	YDL128W	DET1	Q99288	334 aa	Known RBP	4.94	□□□□□ -1.62
VCX1	YDL128W	HTB1	P02293	131 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	HTB2	P02294	131 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	RPL9A	P05738	191 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	PDX1	P16451	410 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	ARF2	P19146	181 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	MIR1	P23641	311 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	FUB1	P25659	250 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	COQ3	P27680	312 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	MGM101	P32787	269 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	ALK2	P32789	676 aa	Predicted RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	YKL107W	P34251	309 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	AIM29	P36154	155 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	CHK1	P38147	527 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	RRN10	P38204	145 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YBR292C	P38357	123 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	TVP23	P38962	199 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	MET30	P39014	640 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YEA4	P40004	342 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YNL195C	P40168	261 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	BTT1	P40314	149 aa	Predicted RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	CIN5	P40917	295 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	PAU5	P43575	122 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YFR020W	P43600	232 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	YJR012C	P47087	207 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	ASK10	P48361	1146 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	BXI1	P48558	297 aa		4.93	□□□□□ -1.62
VCX1	YDL128W	HSV2	P50079	448 aa	Predicted RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	RPL9B	P51401	191 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	TEX1	P53851	422 aa	Known RBP	4.93	□□□□□ -1.62
VCX1	YDL128W	SKO1	Q02100	647 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms