RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C ERG25P53045 309 aa0.98□□□□□ -2.25
VAM6YDL077C COG7P53195 279 aa0.98□□□□□ -2.25
VAM6YDL077C YGR164WP53291 111 aa0.98□□□□□ -2.25
VAM6YDL077C IBD2P53892 351 aa0.98□□□□□ -2.25
VAM6YDL077C TIM8P57744 87 aa0.98□□□□□ -2.25
VAM6YDL077C VPS28Q02767 242 aa0.98□□□□□ -2.25
VAM6YDL077C IRC4Q03036 179 aa0.98□□□□□ -2.25
VAM6YDL077C TMA23Q03525 211 aa0.98□□□□□ -2.25
VAM6YDL077C YMR155WQ03795 547 aa0.98□□□□□ -2.25
VAM6YDL077C HPT1Q04178 221 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YMR087WQ04299 284 aa0.98□□□□□ -2.25
VAM6YDL077C MRPL1Q04599 285 aa0.98□□□□□ -2.25
VAM6YDL077C RRP45Q05636 305 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YLR456WQ06199 204 aa0.98□□□□□ -2.25
VAM6YDL077C CDD1Q06549 142 aa0.98□□□□□ -2.25
VAM6YDL077C ACK1Q07622 623 aaPredicted RBP0.98□□□□□ -2.25
VAM6YDL077C ENT4Q07872 247 aa0.98□□□□□ -2.25
VAM6YDL077C YLR040CQ07988 224 aa0.98□□□□□ -2.25
VAM6YDL077C ALG6Q12001 544 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C FSF1Q12029 327 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C FCF2Q12035 217 aaPredicted RBP0.98□□□□□ -2.25
VAM6YDL077C PST1Q12355 444 aa0.98□□□□□ -2.25
VAM6YDL077C BI3Q9ZZW7 517 aa0.98□□□□□ -2.25
VAM6YDL077C SAL1D6W196 494 aa0.98□□□□□ -2.25
VAM6YDL077C HEM4P06174 275 aa0.98□□□□□ -2.25
VAM6YDL077C GDH1P07262 454 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C SPE1P08432 466 aa0.98□□□□□ -2.25
VAM6YDL077C DPM1P14020 267 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C KRE1P17260 313 aa0.98□□□□□ -2.25
VAM6YDL077C SAM2P19358 384 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C PPH21P23594 369 aa0.98□□□□□ -2.25
VAM6YDL077C GRX1P25373 110 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C ERG9P29704 444 aa0.98□□□□□ -2.25
VAM6YDL077C HOG1P32485 435 aa0.98□□□□□ -2.25
VAM6YDL077C SNC2P33328 115 aa0.98□□□□□ -2.25
VAM6YDL077C SER1P33330 395 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YNK1P36010 153 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C MCR1P36060 302 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C PET10P36139 283 aa0.98□□□□□ -2.25
VAM6YDL077C MRPL36P36531 177 aa0.98□□□□□ -2.25
VAM6YDL077C YBR053CP38235 358 aa0.98□□□□□ -2.25
VAM6YDL077C HSL7P38274 827 aa0.98□□□□□ -2.25
VAM6YDL077C SLM6P38343 150 aa0.98□□□□□ -2.25
VAM6YDL077C URA8P38627 578 aaPredicted RBP0.98□□□□□ -2.25
VAM6YDL077C DOG2P38773 246 aa0.98□□□□□ -2.25
VAM6YDL077C DOG1P38774 246 aa0.98□□□□□ -2.25
VAM6YDL077C XBP1P40489 647 aa0.98□□□□□ -2.25
VAM6YDL077C TIR3P40552 269 aa0.98□□□□□ -2.25
VAM6YDL077C AZF1P41696 914 aa0.98□□□□□ -2.25
VAM6YDL077C YJR015WP47090 510 aa0.98□□□□□ -2.25
VAM6YDL077C OST3P48439 350 aa0.98□□□□□ -2.25
VAM6YDL077C SAM37P50110 327 aa0.98□□□□□ -2.25
VAM6YDL077C BIO3P50277 480 aa0.98□□□□□ -2.25
VAM6YDL077C YGL262WP53054 175 aa0.98□□□□□ -2.25
VAM6YDL077C YIP4P53093 235 aa0.98□□□□□ -2.25
VAM6YDL077C JAC1P53193 184 aa0.98□□□□□ -2.25
VAM6YDL077C YGR015CP53208 328 aa0.98□□□□□ -2.25
VAM6YDL077C UBC7Q02159 165 aa0.98□□□□□ -2.25
VAM6YDL077C AIM34Q03673 198 aa0.98□□□□□ -2.25
VAM6YDL077C YMR160WQ03823 816 aa0.98□□□□□ -2.25
VAM6YDL077C SEC13Q04491 297 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YLR296WQ05898 108 aa0.98□□□□□ -2.25
VAM6YDL077C BNA5Q05979 453 aa0.98□□□□□ -2.25
VAM6YDL077C MCH1Q07376 486 aa0.98□□□□□ -2.25
VAM6YDL077C NRT1Q08485 598 aa0.98□□□□□ -2.25
VAM6YDL077C TGL5Q12043 749 aa0.98□□□□□ -2.25
VAM6YDL077C MCP1Q12106 302 aa0.98□□□□□ -2.25
VAM6YDL077C YLR050CQ12155 161 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C TPT1Q12272 230 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C RKM5Q12367 367 aa0.98□□□□□ -2.25
VAM6YDL077C YPR145C-AQ2V2P0 78 aa0.98□□□□□ -2.25
VAM6YDL077C RPS22BQ3E7Y3 130 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YOR338WQ99326 363 aa0.98□□□□□ -2.25
VAM6YDL077C YEL009C-AA0A023PZF2 135 aa0.98□□□□□ -2.25
VAM6YDL077C YPR096CO13587 100 aa0.98□□□□□ -2.25
VAM6YDL077C MBF1O14467 151 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C HIS1P00498 297 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C HVG1P0CE11 249 aa0.98□□□□□ -2.25
VAM6YDL077C PBI2P0CT04 75 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C RPL12AP0CX53 165 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C RPL12BP0CX54 165 aa0.98□□□□□ -2.25
VAM6YDL077C SPT15P13393 240 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C MSI1P13712 422 aa0.98□□□□□ -2.25
VAM6YDL077C STE18P18852 110 aa0.98□□□□□ -2.25
VAM6YDL077C RBK1P25332 333 aa0.98□□□□□ -2.25
VAM6YDL077C ADH7P25377 361 aa0.98□□□□□ -2.25
VAM6YDL077C BEM1P29366 551 aa0.98□□□□□ -2.25
VAM6YDL077C RPA12P32529 125 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YSC84P32793 468 aa0.98□□□□□ -2.25
VAM6YDL077C TMA19P35691 167 aaKnown RBP0.98□□□□□ -2.25
VAM6YDL077C YKL069WP36088 180 aa0.98□□□□□ -2.25
VAM6YDL077C MRPL27P36526 146 aaPredicted RBP0.98□□□□□ -2.25
VAM6YDL077C YBR071WP38243 211 aa0.98□□□□□ -2.25
VAM6YDL077C UMP1P38293 148 aa0.98□□□□□ -2.25
VAM6YDL077C DER1P38307 211 aa0.98□□□□□ -2.25
VAM6YDL077C TRR2P38816 342 aa0.98□□□□□ -2.25
VAM6YDL077C PEX7P39108 375 aa0.98□□□□□ -2.25
VAM6YDL077C YEL028WP39989 153 aa0.98□□□□□ -2.25
VAM6YDL077C JHD1P40034 492 aa0.98□□□□□ -2.25
VAM6YDL077C MPM1P40364 252 aa0.98□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms