RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	RPL1B	P0CX44	217 aa	Known RBP	10.43	□□□□□ -0.74
PCH2	YBR186W	MRPL44	P19956	98 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	YCR101C	P25607	182 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	MRPL28	P36527	147 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	AIR1	P40507	360 aa	Known RBP	10.43	□□□□□ -0.74
PCH2	YBR186W	PMT3	P47190	753 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	MGA1	P53050	456 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	YMR265C	Q03508	461 aa	Known RBP	10.43	□□□□□ -0.74
PCH2	YBR186W	YOR015W	Q12169	119 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	RLM1	Q12224	676 aa		10.43	□□□□□ -0.74
PCH2	YBR186W	RFA1	P22336	621 aa	Known RBP	10.42	□□□□□ -0.74
PCH2	YBR186W	MEK1	P24719	497 aa	Predicted RBP	10.42	□□□□□ -0.74
PCH2	YBR186W	POP5	P28005	173 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	NEM1	P38757	446 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	IKS1	P47042	667 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	TDA7	P53882	636 aa	Predicted RBP	10.42	□□□□□ -0.74
PCH2	YBR186W	VPS28	Q02767	242 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	YHM2	Q04013	314 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	YLR456W	Q06199	204 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	SRO7	Q12038	1033 aa		10.42	□□□□□ -0.74
PCH2	YBR186W	CYT1	P07143	309 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	ARC40	P38328	384 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	LRO1	P40345	661 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	LSB3	P43603	459 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	TEX1	P53851	422 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	THI74	Q04083	370 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	BNA5	Q05979	453 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	ENB1	Q08299	606 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	YLR118C	Q12354	227 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	MET3	P08536	511 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	FAA1	P30624	700 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	EDS1	P38073	919 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	AIM3	P38266	947 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	YAL037W	P39728	267 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	GPP1	P41277	250 aa	Known RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	BNS1	P50084	137 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	YGL262W	P53054	175 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	EKI1	Q03764	534 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	CUE4	Q04201	117 aa	Predicted RBP	10.41	□□□□□ -0.74
PCH2	YBR186W	ASM4	Q05166	528 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	MHR1	Q06630	226 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	IRC13	Q08630	104 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	MCP1	Q12106	302 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	UBA3	Q99344	299 aa		10.41	□□□□□ -0.74
PCH2	YBR186W	GDH1	P07262	454 aa	Known RBP	10.4	□□□□□ -0.74
PCH2	YBR186W	KRR1	P25586	316 aa	Predicted RBP	10.4	□□□□□ -0.74
PCH2	YBR186W	RFA3	P26755	122 aa	Known RBP	10.4	□□□□□ -0.74
PCH2	YBR186W	PPA2	P28239	310 aa		10.4	□□□□□ -0.74
PCH2	YBR186W	CPR5	P35176	225 aa		10.4	□□□□□ -0.74
PCH2	YBR186W	YNL208W	P40159	199 aa	Known RBP	10.4	□□□□□ -0.74
PCH2	YBR186W	YIL108W	P40483	696 aa	Known RBP	10.4	□□□□□ -0.74
PCH2	YBR186W	ARR2	Q06597	130 aa		10.4	□□□□□ -0.74
PCH2	YBR186W	CTR3	Q06686	241 aa		10.4	□□□□□ -0.74
PCH2	YBR186W	THI73	Q07904	523 aa		10.4	□□□□□ -0.74
PCH2	YBR186W	MIR1	P23641	311 aa	Known RBP	10.39	□□□□□ -0.75
PCH2	YBR186W	PTP1	P25044	335 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	AGA2	P32781	87 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	FRM2	P37261	193 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	FAT1	P38225	669 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	OM14	P38325	134 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	TRS20	P38334	175 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	YBR292C	P38357	123 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	YHR180W	P38868	163 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	YAP1802	P53309	568 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	YNR066C	P53752	436 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	SAM50	P53969	484 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	ERG13	P54839	491 aa	Known RBP	10.39	□□□□□ -0.75
PCH2	YBR186W	AVO2	Q04749	426 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	CCH1	P50077	2039 aa		10.39	□□□□□ -0.75
PCH2	YBR186W	TY1A-H	P0C2I4	478 aa	Known RBP	10.38	□□□□□ -0.75
PCH2	YBR186W	MRPS9	P38120	278 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	RNH201	P53942	307 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	YDR387C	Q04162	555 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	10.38	□□□□□ -0.75	not detected
PCH2	YBR186W	SOL3	P38858	249 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	NOP16	P40007	231 aa	Known RBP	10.38	□□□□□ -0.75
PCH2	YBR186W	YDR444W	Q04093	687 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	YOR343C	Q12484	108 aa		10.38	□□□□□ -0.75
PCH2	YBR186W	MRS4	P23500	304 aa		10.37	□□□□□ -0.75
PCH2	YBR186W	SUR2	P38992	349 aa		10.37	□□□□□ -0.75
PCH2	YBR186W	YJR011C	P47086	261 aa	Predicted RBP	10.37	□□□□□ -0.75
PCH2	YBR186W	YJR141W	P47172	347 aa	Predicted RBP	10.37	□□□□□ -0.75
PCH2	YBR186W	CYT2	Q00873	224 aa		10.37	□□□□□ -0.75
PCH2	YBR186W	YPR174C	Q06616	221 aa	Predicted RBP	10.37	□□□□□ -0.75
PCH2	YBR186W	SNF5	P18480	905 aa		10.36	□□□□□ -0.75
PCH2	YBR186W	PHS1	P40857	217 aa		10.36	□□□□□ -0.75
PCH2	YBR186W	YFR054C	P43622	192 aa		10.36	□□□□□ -0.75
PCH2	YBR186W	COQ5	P49017	307 aa		10.36	□□□□□ -0.75
PCH2	YBR186W	MGE1	P38523	228 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	FLO5	P38894	1075 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	IRC24	P40580	263 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	ALG12	P53730	551 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	IZH2	Q12442	317 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	COA6	Q3E846	104 aa		10.35	□□□□□ -0.75
PCH2	YBR186W	MSW1	P04803	379 aa		10.34	□□□□□ -0.75
PCH2	YBR186W	DAT1	P13483	248 aa	Known RBP	10.34	□□□□□ -0.75
PCH2	YBR186W	SPT23	P35210	1082 aa		10.34	□□□□□ -0.75
PCH2	YBR186W	YMR082C	Q04276	118 aa		10.34	□□□□□ -0.75
PCH2	YBR186W	AGE1	Q04412	482 aa		10.34	□□□□□ -0.75
PCH2	YBR186W	TDA6	Q06466	467 aa		10.34	□□□□□ -0.75

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms