RNA–Protein interactions for RNA: YAL023C

PMT2, Transcript of Protein O-mannosyltransferase of the ER membrane, yeast

Gene PMT2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMT2	YAL023C	COS10	P52924	374 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	SNO1	Q03144	224 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	TVP15	Q03860	143 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	SEC13	Q04491	297 aa	Known RBP	4.82	□□□□□ -1.64
PMT2	YAL023C	YMR310C	Q04867	317 aa	Predicted RBP	4.82	□□□□□ -1.64
PMT2	YAL023C	ERP1	Q05359	219 aa	Known RBP	4.82	□□□□□ -1.64
PMT2	YAL023C	FDH1	Q08911	376 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	YPR145C-A	Q2V2P0	78 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	MEX67	Q99257	599 aa	Known RBP	4.82	□□□□□ -1.64
PMT2	YAL023C	YOR338W	Q99326	363 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	PET20	Q99373	253 aa		4.82	□□□□□ -1.64
PMT2	YAL023C	ASP3-2	P0CX77	362 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	ASP3-3	P0CX78	362 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	ASP3-4	P0CX79	362 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	ASP3-1	P0CZ17	362 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	REV1	P12689	985 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	EXG1	P23776	448 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	CSM1	P25651	190 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	MIX23	P38162	196 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YGL185C	P53100	379 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	PNC1	P53184	216 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	YNL184C	P53876	108 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	DIA1	P54005	336 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	PEX30	Q06169	523 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YDR262W	Q12331	272 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	HAP2	P06774	265 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	RPB3	P16370	318 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	PET18	P25362	215 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	ADE1	P27616	306 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YMR144W	P40214	342 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	OST1	P41543	476 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	PEX31	P53203	462 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YGR117C	P53270	476 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	NRK1	P53915	240 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YNL033W	P53964	284 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YNL019C	P53975	284 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YPL067C	Q02754	198 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YDR391C	Q04170	232 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	YDR124W	Q04608	324 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	BER1	Q06688	274 aa	Known RBP	4.81	□□□□□ -1.64
PMT2	YAL023C	PRM4	Q12498	284 aa		4.81	□□□□□ -1.64
PMT2	YAL023C	ACB1	P31787	87 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YOX1	P34161	385 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	ATG8	P38182	117 aa	RIP-Chip data	4.8	□□□□□ -1.64	not detected
PMT2	YAL023C	AME1	P38313	324 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	FET3	P38993	636 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	PRP39	P39682	629 aa	Known RBP	4.8	□□□□□ -1.64
PMT2	YAL023C	YFL040W	P43562	540 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YHC3	P47040	408 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YJR012C	P47087	207 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YDL186W	P48568	277 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	FLC3	P53121	802 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YDR366C	P87287	132 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	CTF19	Q02732	369 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YMR181C	Q03231	154 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	CAB5	Q03941	241 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	YGK3	Q12222	375 aa	Predicted RBP	4.8	□□□□□ -1.64
PMT2	YAL023C	MHT1	Q12525	324 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	DDI2	P0CH63	225 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	DDI3	P0CH64	225 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	PUT3	P25502	979 aa	Predicted RBP	4.8	□□□□□ -1.64
PMT2	YAL023C	COS9	P36034	407 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	BDH1	P39714	382 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	COG3	P40094	801 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	LYS12	P40495	371 aa	Known RBP	4.8	□□□□□ -1.64
PMT2	YAL023C	GDS1	P41913	522 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	MPA43	P53583	542 aa	Predicted RBP	4.8	□□□□□ -1.64
PMT2	YAL023C	YML096W	Q04489	525 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	DAP1	Q12091	152 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	TFC7	Q12415	435 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	VMA9	Q3E7B6	73 aa		4.8	□□□□□ -1.64
PMT2	YAL023C	MXR2	P25566	168 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	ATG15	P25641	520 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	SUA7	P29055	345 aa	Predicted RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	SUA5	P32579	426 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	KKQ8	P36004	724 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	MRPL28	P36527	147 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	YPT31	P38555	223 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	PEP8	P40335	379 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	GLR1	P41921	483 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	NUP57	P48837	541 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	YNL095C	P53932	642 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	CCE1	Q03702	353 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	GMC1	Q04399	608 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	RIF2	Q06208	395 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	ASR1	Q06834	288 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	MRX9	Q07349	420 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	GAT3	Q07928	141 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	YPL245W	Q12179	454 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	TPO4	Q12256	659 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	MRPL23	Q12487	163 aa	Predicted RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	SPS2	P08459	502 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	RPL20A	P0CX23	172 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	RPL20B	P0CX24	172 aa	Predicted RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	CPR1	P14832	162 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	YCL068C	P25593	260 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	YPT53	P36019	220 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	RCK1	P38622	512 aa		4.79	□□□□□ -1.64
PMT2	YAL023C	SMB1	P40018	196 aa	Known RBP	4.79	□□□□□ -1.64
PMT2	YAL023C	SFH5	P47008	294 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms