RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	AEP3	Q12089	606 aa		11.55	□□□□□ -0.56
SSA1	YAL005C	CYC1	P00044	109 aa	Predicted RBP	11.54	□□□□□ -0.56
SSA1	YAL005C	GLC7	P32598	312 aa	Known RBP	11.54	□□□□□ -0.56
SSA1	YAL005C	UMP1	P38293	148 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	SYS1	P41544	203 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	MTL1	P53214	551 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	EOS1	P53938	366 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	SPS100	P13130	326 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	HXT2	P23585	541 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	ARO4	P32449	370 aa	Known RBP	11.54	□□□□□ -0.56
SSA1	YAL005C	MCH2	P36032	473 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	YGP1	P38616	354 aa	Known RBP	11.54	□□□□□ -0.56
SSA1	YAL005C	SYG1	P40528	902 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	CAT5	P41735	233 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	AVT4	P50944	713 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	TPN1	P53099	579 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	PEF1	P53238	335 aa		11.54	□□□□□ -0.56
SSA1	YAL005C	USB1	Q12208	290 aa	Known RBP	11.54	□□□□□ -0.56
SSA1	YAL005C	MSI1	P13712	422 aa		11.53	□□□□□ -0.56
SSA1	YAL005C	SEC66	P33754	206 aa		11.53	□□□□□ -0.56
SSA1	YAL005C	YND1	P40009	630 aa		11.53	□□□□□ -0.56
SSA1	YAL005C	YGR042W	P53227	271 aa		11.53	□□□□□ -0.56
SSA1	YAL005C	ODC2	Q99297	307 aa		11.53	□□□□□ -0.56
SSA1	YAL005C	YBR220C	P38318	560 aa		11.52	□□□□□ -0.56
SSA1	YAL005C	YHR122W	P38829	231 aa		11.52	□□□□□ -0.56
SSA1	YAL005C	SOL3	P38858	249 aa		11.52	□□□□□ -0.56
SSA1	YAL005C	BXI1	P48558	297 aa		11.52	□□□□□ -0.56
SSA1	YAL005C	UBC13	P52490	153 aa		11.52	□□□□□ -0.56
SSA1	YAL005C	RRS1	Q08746	203 aa	Known RBP	11.52	□□□□□ -0.56
SSA1	YAL005C	RPA14	P50106	137 aa		11.52	□□□□□ -0.57
SSA1	YAL005C	LSM7	P53905	115 aa	Known RBP	11.52	□□□□□ -0.57
SSA1	YAL005C	NDE2	Q07500	545 aa		11.52	□□□□□ -0.57
SSA1	YAL005C	SRL2	Q12020	392 aa		11.52	□□□□□ -0.57
SSA1	YAL005C	SUR2	P38992	349 aa		11.51	□□□□□ -0.57
SSA1	YAL005C	YMR144W	P40214	342 aa	Known RBP	11.51	□□□□□ -0.57
SSA1	YAL005C	YIL029C	P40538	142 aa		11.51	□□□□□ -0.57
SSA1	YAL005C	NSA1	P53136	463 aa	Predicted RBP	11.51	□□□□□ -0.57
SSA1	YAL005C	MRPL50	P53724	139 aa		11.51	□□□□□ -0.57
SSA1	YAL005C	YCR016W	P25617	290 aa	Known RBP	11.5	□□□□□ -0.57
SSA1	YAL005C	REC114	P32841	428 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	YKE4	P40544	346 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	ARO8	P53090	500 aa	Known RBP	11.5	□□□□□ -0.57
SSA1	YAL005C	YKR005C	Q02203	525 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	CKA1	P15790	372 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	MTR2	P34232	184 aa	Known RBP	11.5	□□□□□ -0.57
SSA1	YAL005C	OTU1	P43558	301 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	HUT1	Q12520	339 aa		11.5	□□□□□ -0.57
SSA1	YAL005C	HTZ1	Q12692	134 aa	Known RBP	11.5	□□□□□ -0.57
SSA1	YAL005C	GPM1	P00950	247 aa	Known RBP	11.49	□□□□□ -0.57
SSA1	YAL005C	PET122	P10355	254 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	PET54	P10834	293 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	SAG1	P20840	650 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	not detected
SSA1	YAL005C	SUA5	P32579	426 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	SRL3	P36167	246 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	MRX9	Q07349	420 aa	Known RBP	11.49	□□□□□ -0.57
SSA1	YAL005C	RFU1	Q08003	200 aa		11.49	□□□□□ -0.57
SSA1	YAL005C	CHO1	P08456	276 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	RPL3	P14126	387 aa	Known RBP	11.48	□□□□□ -0.57
SSA1	YAL005C	APA2	P22108	325 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	HYM1	P32464	399 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	ARC40	P38328	384 aa	Known RBP	11.48	□□□□□ -0.57
SSA1	YAL005C	SLX9	P53251	210 aa	Predicted RBP	11.48	□□□□□ -0.57
SSA1	YAL005C	CRZ1	P53968	678 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	DLT1	Q04216	342 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	GAT3	Q07928	141 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	CDC28	P00546	298 aa	Known RBP	11.48	□□□□□ -0.57
SSA1	YAL005C	PIC2	P40035	300 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	HAM1	P47119	197 aa	Known RBP	11.48	□□□□□ -0.57
SSA1	YAL005C	MSE1	P48525	536 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	SKO1	Q02100	647 aa		11.48	□□□□□ -0.57
SSA1	YAL005C	YBL010C	P32788	280 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	VAM7	P32912	316 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	ARO9	P38840	513 aa	Predicted RBP	11.47	□□□□□ -0.57
SSA1	YAL005C	UTP15	Q04305	513 aa	Known RBP	11.47	□□□□□ -0.57
SSA1	YAL005C	HNT1	Q04344	158 aa	Known RBP	11.47	□□□□□ -0.57
SSA1	YAL005C	YPR196W	Q06595	470 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	PML1	Q07930	204 aa	Predicted RBP	11.47	□□□□□ -0.57
SSA1	YAL005C	VMA5	P31412	392 aa	Known RBP	11.47	□□□□□ -0.57
SSA1	YAL005C	RNP1	P32385	249 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	MRPL36	P36531	177 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	CIN5	P40917	295 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	RTS2	P40962	232 aa		11.47	□□□□□ -0.57
SSA1	YAL005C	URA6	P15700	204 aa		11.46	□□□□□ -0.58
SSA1	YAL005C	AGA2	P32781	87 aa		11.46	□□□□□ -0.58
SSA1	YAL005C	YER079W	P40052	210 aa	Known RBP	11.46	□□□□□ -0.58
SSA1	YAL005C	YLR031W	Q07978	186 aa		11.46	□□□□□ -0.58
SSA1	YAL005C	ENV7	Q12003	364 aa		11.46	□□□□□ -0.58
SSA1	YAL005C	YBR184W	P38299	523 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	PRS3	P38689	320 aa	Known RBP	11.45	□□□□□ -0.58
SSA1	YAL005C	AIM25	P47140	327 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	YDC1	Q02896	317 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	YMR279C	Q03263	540 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	TY1A-MR1	Q04215	440 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	YPR098C	Q06089	161 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	YCP4	P25349	247 aa	Known RBP	11.45	□□□□□ -0.58
SSA1	YAL005C	FAT1	P38225	669 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	OSH7	P38755	437 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	UFD1	P53044	361 aa		11.45	□□□□□ -0.58
SSA1	YAL005C	YTH1	Q06102	208 aa	Predicted RBP	11.45	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms