RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 OR6B1O95007 311 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 BMP15O95972 392 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 IFIT1P09914 478 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SRGNP10124 158 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SERPINB6P35237 376 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 UBA7P41226 1012 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 GSTM4Q03013 218 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ACAP1Q15027 740 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 MEA1Q16626 185 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 LONRF1Q17RB8 773 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 MAP3K21Q5TCX8 1036 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 VPS36Q86VN1 386 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 CROCCP3Q8IVE0 287 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 CRACR2BQ8N4Y2 399 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ENDOVQ8N8Q3 282 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 GATA6Q92908 595 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 TLCD1Q96CP7 247 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SRPK1Q96SB4 655 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 MAP3K14Q99558 947 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 FAM237AA0A1B0GTK4 181 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SNAP23O00161 211 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 FBP2O00757 339 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 OXSR1O95747 527 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 GAS8O95995 478 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 FGAP02671 866 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 RASA1P20936 1047 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 RFC4P35249 363 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 NEK3P51956 506 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 GEMIN4P57678 1058 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 C1orf146Q5VVC0 180 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 DUS1LQ6P1R4 473 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ASRGL1Q7L266 308 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ECHDC2Q86YB7 292 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF713Q8N859 430 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SYT2Q8N9I0 419 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 EIF1ADQ8N9N8 165 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 FAM136AQ96C01 138 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 TUBB6Q9BUF5 446 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 NEUROG2Q9H2A3 272 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 METTL14Q9HCE5 456 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 PARP2Q9UGN5 583 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 DDX25Q9UHL0 483 aaKnown RBP7.55□□□□□ -1.2
NECAP1-213ENST00000638883 USP20Q9Y2K6 914 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 SPO11Q9Y5K1 396 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 XIRP2A4UGR9 3374 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 WDFY3Q8IZQ1 3526 aa7.55□□□□□ -1.2
NECAP1-213ENST00000638883 ARID2Q68CP9 1835 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GOLGA8TH3BQL2 631 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 RNF113AO15541 343 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TBX10O75333 385 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GOLGA8HP0CJ92 632 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PPP1R2P41236 205 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ZAP70P43403 619 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 NOP14P78316 857 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 DPYDQ12882 1025 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ATP1A4Q13733 1029 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TMEM266Q2M3C6 531 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CRTC2Q53ET0 693 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TAF1BQ53T94 588 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PPP1R2P3Q6NXS1 205 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 KLHL35Q6PF15 583 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CLEC4GQ6UXB4 293 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SULF1Q8IWU6 871 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ANKRD2Q9GZV1 360 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 DHX36Q9H2U1 1008 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 GOLPH3Q9H4A6 298 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ADAMTS1Q9UHI8 967 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TACC3Q9Y6A5 838 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SPENQ96T58 3664 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 A0A0G2JND7 137 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CASQ2O14958 399 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ADCY6O43306 1168 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 DDHD2O94830 711 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 FGGP02679 453 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TKTP29401 623 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PTK7Q13308 1070 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 LPIN1Q14693 890 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 HLFQ16534 295 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CERKLQ49MI3 558 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ZNF280CQ8ND82 737 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 TBC1D16Q8TBP0 767 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ERLEC1Q96DZ1 483 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 SEPT11Q9NVA2 429 aaKnown RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ARHGAP20Q9P2F6 1191 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 ARPP21Q9UBL0 812 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-213ENST00000638883 CCPG1Q9ULG6 757 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 PCDH11XQ9BZA7 1347 aa7.54□□□□□ -1.2
NECAP1-213ENST00000638883 HAX1O00165 279 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms