RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 U2AF1L4Q8WU68 220 aaKnown RBP11.14□□□□□ -0.63
LINC00598-216ENST00000638163 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 HAPLN2Q9GZV7 340 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 IKZF4Q9H2S9 585 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 PDE11AQ9HCR9 933 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 CNTN3Q9P232 1028 aa11.14□□□□□ -0.63
LINC00598-216ENST00000638163 ZNF500O60304 480 aaPredicted RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 OFD1O75665 1012 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 NOL4O94818 638 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 TFRCP02786 760 aaKnown RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 C4BPAP04003 597 aaKnown RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 EDN1P05305 212 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 CKBP12277 381 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 SELPP16109 830 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 RFC2P35250 354 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ADKP55263 362 aaKnown RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 DLG4P78352 724 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ZNF200P98182 395 aaPredicted RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 TMEM62Q0P6H9 643 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 NCOA4Q13772 614 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 SPA17Q15506 151 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ASIC2Q16515 512 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 EEF1DP3Q658K8 133 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 FAM126BQ8IXS8 530 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 BEST2Q8NFU1 509 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 LMO3Q8TAP4 145 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 KIAA1524Q8TCG1 905 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 BAP1Q92560 729 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ZBTB10Q96DT7 871 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 CALR3Q96L12 384 aaKnown RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 CCDC42Q96M95 316 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 DEF6Q9H4E7 631 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ERVK-5Q9HDB9 667 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 UBQLN1Q9UMX0 589 aaKnown RBP11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ST3GAL5Q9UNP4 418 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 GIT1Q9Y2X7 761 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 CENPFP49454 3210 aa11.13□□□□□ -0.63
LINC00598-216ENST00000638163 ARHGEF37A1IGU5 675 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 LRRC53A6NM62 1247 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 F8VZ95 297 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 NPTXRO95502 500 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 ASS1P00966 412 aaKnown RBP11.12□□□□□ -0.63
LINC00598-216ENST00000638163 HLA-DRAP01903 254 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 CHRNA1P02708 482 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 CXCL8P10145 99 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 KCNE1P15382 129 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 SLC9A1P19634 815 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 SOX5P35711 763 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 JAM2P57087 298 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 RBP5P82980 135 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 RAPGEF1Q13905 1077 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 ZNF662Q6ZS27 426 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 LRRC8DQ7L1W4 858 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 ZNF677Q86XU0 584 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 LRRC52Q8N7C0 313 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 TMEM40Q8WWA1 233 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 CPB2Q96IY4 423 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 SNX27Q96L92 541 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 ZNF560Q96MR9 790 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 PPP1R16BQ96T49 567 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 TSGA10Q9BZW7 698 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 KCNF1Q9H3M0 494 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 SIX2Q9NPC8 291 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 TRMT13Q9NUP7 481 aaKnown RBP11.12□□□□□ -0.63
LINC00598-216ENST00000638163 FAM105AQ9NUU6 356 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 DNAJC12Q9UKB3 198 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 NOC2LQ9Y3T9 749 aaKnown RBP11.12□□□□□ -0.63
LINC00598-216ENST00000638163 EVPLQ92817 2033 aa11.12□□□□□ -0.63
LINC00598-216ENST00000638163 A0A0U1RQF3 1178 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 EIF3CLB5ME19 914 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 HOXA2O43364 376 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 EOMESO95936 686 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TNFSF9P41273 254 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 NOP14P78316 857 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TFAMQ00059 246 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 KLHL30Q0D2K2 578 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 BMS1Q14692 1282 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 MTFR1Q15390 333 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TDRD12Q587J7 1177 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TDRD10Q5VZ19 366 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 MRPL10Q7Z7H8 261 aaKnown RBP11.11□□□□□ -0.63
LINC00598-216ENST00000638163 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 PLEKHO2Q8TD55 490 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
LINC00598-216ENST00000638163 SHC3Q92529 594 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms