RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 RFPL2O75678 378 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 KCNE1P15382 129 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 GBP2P32456 591 aaPredicted RBP20.72■□□□□ 0.91
CLN6-221ENST00000637494 LIG4P49917 911 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 MCM6Q14566 821 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 UPP1Q16831 310 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 XKR4Q5GH76 650 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 ALKAL1Q6UXT8 129 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 LNX1Q8TBB1 728 aaPredicted RBP20.72■□□□□ 0.91
CLN6-221ENST00000637494 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 ZSCAN16Q9H4T2 348 aaPredicted RBP20.72■□□□□ 0.91
CLN6-221ENST00000637494 GOLGA2P5Q9HBQ8 144 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 WDR6Q9NNW5 1121 aaKnown RBP20.72■□□□□ 0.91
CLN6-221ENST00000637494 CNTN3Q9P232 1028 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 NUB1Q9Y5A7 615 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 CLIC4Q9Y696 253 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 PLXNA3P51805 1871 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 CLUHO75153 1309 aa20.72■□□□□ 0.91
CLN6-221ENST00000637494 TRAK2O60296 914 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
CLN6-221ENST00000637494 RPL9P32969 192 aaKnown RBP20.71■□□□□ 0.91
CLN6-221ENST00000637494 DDIT3P35638 169 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 MCL1Q07820 350 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 LILRA6Q6PI73 481 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 ANKS3Q6ZW76 656 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 FBXL6Q8N531 539 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 KRI1Q8N9T8 703 aaKnown RBP20.71■□□□□ 0.91
CLN6-221ENST00000637494 ZBTB45Q96K62 511 aaPredicted RBP20.71■□□□□ 0.91
CLN6-221ENST00000637494 CLSTN3Q9BQT9 956 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 PRKD2Q9BZL6 878 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 FOXD4L1Q9NU39 408 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 BLOC1S4Q9NUP1 217 aa20.71■□□□□ 0.91
CLN6-221ENST00000637494 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.71■□□□□ 0.91
CLN6-221ENST00000637494 PODXLO00592 558 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 ABLIM1O14639 778 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 HNRNPDLO14979 420 aaKnown RBP20.7■□□□□ 0.9
CLN6-221ENST00000637494 ZMYND10O75800 440 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 CLTAP09496 248 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 FGFR3P22607 806 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
CLN6-221ENST00000637494 GRIN1Q05586 938 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 RESTQ13127 1097 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 PPM1LQ5SGD2 360 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 PRRX2Q99811 253 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 PLEKHA5Q9HAU0 1116 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 STK17AQ9UEE5 414 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 FBXW11Q9UKB1 542 aa20.7■□□□□ 0.9
CLN6-221ENST00000637494 SRPRBQ9Y5M8 271 aaKnown RBP20.7■□□□□ 0.9
CLN6-221ENST00000637494 DENND4AQ7Z401 1863 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 ASGR2P07307 311 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 HNRNPA1P09651 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
CLN6-221ENST00000637494 OR1D2P34982 312 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.69■□□□□ 0.92e-9■■■■■ 36.3
CLN6-221ENST00000637494 IGSF9Q9P2J2 1179 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 MTRRQ9UBK8 725 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 TBX20Q9UMR3 447 aa20.69■□□□□ 0.9
CLN6-221ENST00000637494 XPOTO43592 962 aaKnown RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 STX6O43752 255 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 XYLBO75191 536 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 TKTP29401 623 aaKnown RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 BRCC3P46736 316 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 ZNF131P52739 623 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 PPP2R3AQ06190 1150 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 SOX4Q06945 474 aaPredicted RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 RAB33AQ14088 237 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 PTPAQ15257 358 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 SEZ6Q53EL9 994 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 SPECC1Q5M775 1068 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 RRAGBQ5VZM2 374 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 KCNN1Q92952 543 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 ZNF707Q96C28 371 aaPredicted RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 ASIC4Q96FT7 647 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 EPSTI1Q96J88 318 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 ZMAT2Q96NC0 199 aaKnown RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 FBXO2Q9UK22 296 aaPredicted RBP20.68■□□□□ 0.9
CLN6-221ENST00000637494 BACE2Q9Y5Z0 518 aa20.68■□□□□ 0.9
CLN6-221ENST00000637494 H7C4K7 107 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 PAPLNO95428 1278 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 C8AP07357 584 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
CLN6-221ENST00000637494 HOXA9P31269 272 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 MCM4P33991 863 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 TDGQ13569 410 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 UVSSAQ2YD98 709 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 SLC10A6Q3KNW5 377 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 RTL10Q7L3V2 364 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 FEZF2Q8TBJ5 459 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 MFSD1Q9H3U5 465 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 RPF1Q9H9Y2 349 aaKnown RBP20.67■□□□□ 0.9
CLN6-221ENST00000637494 CDY1Q9Y6F8 540 aa20.67■□□□□ 0.9
CLN6-221ENST00000637494 MTCL1Q9Y4B5 1905 aaKnown RBP20.66■□□□□ 0.9
CLN6-221ENST00000637494 C2orf16Q68DN1 1984 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 I3L4J1 428 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 SYN3O14994 580 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 PIGRP01833 764 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 CXCL8P10145 99 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 AXDND1Q5T1B0 1012 aaPredicted RBP20.66■□□□□ 0.9
CLN6-221ENST00000637494 FAM173BQ6P4H8 233 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 CCDC73Q6ZRK6 1079 aa20.66■□□□□ 0.9
CLN6-221ENST00000637494 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms