RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 SNX27Q96L92 541 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 BACH2Q9BYV9 841 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 SMOC2Q9H3U7 446 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 GOLGA2P5Q9HBQ8 144 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 SLC38A7Q9NVC3 462 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 LARSQ9P2J5 1176 aaKnown RBP13.26□□□□□ -0.29
UBR1-212ENST00000627960 FBXW11Q9UKB1 542 aa13.26□□□□□ -0.29
UBR1-212ENST00000627960 CLUHO75153 1309 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 H0YCG3 227 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 MEFVO15553 781 aaPredicted RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 ADAM12O43184 909 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 TRAPPC3O43617 180 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 N4BP1O75113 896 aaKnown RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 PDGFBP01127 241 aaPredicted RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 HARSP12081 509 aaKnown RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 IER5LQ5T953 404 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 C3orf58Q8NDZ4 430 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 STAMQ92783 540 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 KCNN1Q92952 543 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 ZMAT2Q96NC0 199 aaKnown RBP13.25□□□□□ -0.29
UBR1-212ENST00000627960 KCNK12Q9HB15 430 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 CNTN3Q9P232 1028 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 MTRRQ9UBK8 725 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 ODF2LQ9ULJ1 636 aa13.25□□□□□ -0.29
UBR1-212ENST00000627960 PLCG1P19174 1290 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 AVPR2P30518 371 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 GBP2P32456 591 aaPredicted RBP13.24□□□□□ -0.29
UBR1-212ENST00000627960 OR1D2P34982 312 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 BRCC3P46736 316 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
UBR1-212ENST00000627960 NHLH1Q02575 133 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 MCL1Q07820 350 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 TDGQ13569 410 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 RAB33AQ14088 237 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
UBR1-212ENST00000627960 MCM6Q14566 821 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 NOLC1Q14978 699 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBR1-212ENST00000627960 SLC10A6Q3KNW5 377 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 RSPO2Q6UXX9 243 aaPredicted RBP13.24□□□□□ -0.29
UBR1-212ENST00000627960 HAUS6Q7Z4H7 955 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 PRSS33Q8NF86 280 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 RAD54LQ92698 747 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 MYADMQ96S97 322 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 PRRX2Q99811 253 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 CCSER1Q9C0I3 900 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 IGSF9Q9P2J2 1179 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 ANKFY1Q9P2R3 1169 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 CLIC4Q9Y696 253 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 WDFY4Q6ZS81 3184 aa13.24□□□□□ -0.29
UBR1-212ENST00000627960 I3L4J1 428 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 PODXLO00592 558 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 CLDN3O15551 220 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 FAM13AO94988 1023 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 HNRNPA1P09651 372 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBR1-212ENST00000627960 SYT1P21579 422 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 SCP2P22307 547 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
UBR1-212ENST00000627960 RPL9P32969 192 aaKnown RBP13.23□□□□□ -0.29
UBR1-212ENST00000627960 ZNF131P52739 623 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 RESTQ13127 1097 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 PTPAQ15257 358 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 SEZ6Q53EL9 994 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 PPM1LQ5SGD2 360 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 MYCT1Q8N699 235 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 RASSF8Q8NHQ8 419 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 C18orf25Q96B23 403 aaPredicted RBP13.23□□□□□ -0.29
UBR1-212ENST00000627960 INTS4Q96HW7 963 aaKnown RBP13.23□□□□□ -0.29
UBR1-212ENST00000627960 HAPLN2Q9GZV7 340 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBR1-212ENST00000627960 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 CDY1Q9Y6F8 540 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 PIEZO1Q92508 2521 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
UBR1-212ENST00000627960 KRT18P05783 430 aaKnown RBP13.22□□□□□ -0.29
UBR1-212ENST00000627960 C8AP07357 584 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 MARCKSP29966 332 aaPredicted RBP13.22□□□□□ -0.29
UBR1-212ENST00000627960 HOXA9P31269 272 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 DDIT3P35638 169 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBR1-212ENST00000627960 UVSSAQ2YD98 709 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
UBR1-212ENST00000627960 ANKS3Q6ZW76 656 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 USP49Q70CQ1 688 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
UBR1-212ENST00000627960 BICD1Q96G01 975 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 EPSTI1Q96J88 318 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 PLEKHA5Q9HAU0 1116 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 PARVGQ9HBI0 331 aa13.22□□□□□ -0.29
UBR1-212ENST00000627960 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
UBR1-212ENST00000627960 TBX20Q9UMR3 447 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms