RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 MCOLN2Q8IZK6 566 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 MCPH1Q8NEM0 835 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 ATP6V0A1Q93050 837 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 GPRASP2Q96D09 838 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 CDC42EP4Q9H3Q1 356 aaKnown RBP20.49■□□□□ 0.87
PTBP1-220ENST00000627714 PCDHB2Q9Y5E7 798 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 CCT8L1PA6NM43 557 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 DNAJC8O75937 253 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-220ENST00000627714 GSTA1P08263 222 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 SCP2P22307 547 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 CENPCQ03188 943 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 RHBDF2Q6PJF5 856 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 NLRX1Q86UT6 975 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 CPNE8Q86YQ8 564 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 KIFC3Q9BVG8 833 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 TOPORSQ9NS56 1045 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-220ENST00000627714 ASIC3Q9UHC3 531 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 KCNG1Q9UIX4 513 aa20.49■□□□□ 0.87
PTBP1-220ENST00000627714 ZBTB12Q9Y330 459 aaPredicted RBP20.49■□□□□ 0.87
PTBP1-220ENST00000627714 ZBED4O75132 1171 aa20.48■□□□□ 0.87
PTBP1-220ENST00000627714 CCDC25Q86WR0 208 aa20.48■□□□□ 0.87
PTBP1-220ENST00000627714 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
PTBP1-220ENST00000627714 CEP170P1Q96L14 293 aa20.48■□□□□ 0.87
PTBP1-220ENST00000627714 TESPA1A2RU30 521 aaPredicted RBP20.47■□□□□ 0.87
PTBP1-220ENST00000627714 HNRNPDLO14979 420 aaKnown RBP20.47■□□□□ 0.87
PTBP1-220ENST00000627714 CHUKO15111 745 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 DGAT1O75907 488 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 XRCC4Q13426 336 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 CNGA2Q16280 664 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 TBC1D10BQ4KMP7 808 aaPredicted RBP20.47■□□□□ 0.87
PTBP1-220ENST00000627714 C15orf39Q6ZRI6 1047 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 C1orf54Q8WWF1 131 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 PRMT1Q99873 361 aaKnown RBP20.47■□□□□ 0.87
PTBP1-220ENST00000627714 CCND2P30279 289 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 SLCO1A2P46721 670 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 PPP1R2P3Q6NXS1 205 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 LRRC34Q8IZ02 419 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 BBOF1Q8ND07 529 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 UHMK1Q8TAS1 419 aaKnown RBP20.47■□□□□ 0.87
PTBP1-220ENST00000627714 BSNDQ8WZ55 320 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 SGSM3Q96HU1 749 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 ARID2Q68CP9 1835 aa20.47■□□□□ 0.87
PTBP1-220ENST00000627714 CLDN10P78369 228 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 WDR44Q5JSH3 913 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 TRIM72Q6ZMU5 477 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 FUKQ8N0W3 1084 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 ATL2Q8NHH9 583 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 TRAIPQ9BWF2 469 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 DCLK3Q9C098 648 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 YY1AP1Q9H869 796 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 AAASQ9NRG9 546 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 MROH7Q68CQ1 1323 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 TP73O15350 636 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 TCEA3O75764 348 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 ATF2P15336 505 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 NSFP46459 744 aaKnown RBP20.46■□□□□ 0.87
PTBP1-220ENST00000627714 UBAP2Q5T6F2 1119 aaKnown RBP20.46■□□□□ 0.87
PTBP1-220ENST00000627714 MYPNQ86TC9 1320 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 EXOC3L1Q86VI1 746 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 TTLL6Q8N841 843 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 IFT74Q96LB3 600 aa20.46■□□□□ 0.87
PTBP1-220ENST00000627714 PSTPIP1O43586 416 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 EXTL3O43909 919 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 SORBS3O60504 671 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 TTC4O95801 387 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CYP1A1P04798 512 aaPredicted RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 VIMP08670 466 aaKnown RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 SPRED3Q2MJR0 410 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 LIN9Q5TKA1 542 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CYB5D1Q6P9G0 228 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CEP128Q6ZU80 1094 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 TRMT1LQ7Z2T5 733 aaKnown RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 BICD1Q96G01 975 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 FAM213AQ9BRX8 229 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CCDC113Q9H0I3 377 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 GABBR1Q9UBS5 961 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 PROSCO94903 275 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 PSAPP07602 524 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 IVDP26440 423 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CCDC91Q7Z6B0 441 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 IPO4Q8TEX9 1081 aaKnown RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 ARHGEF2Q92974 986 aaKnown RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 DDX27Q96GQ7 796 aaKnown RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 JPH2Q9BR39 696 aaPredicted RBP20.45■□□□□ 0.86
PTBP1-220ENST00000627714 PDLIM7Q9NR12 457 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 CHST7Q9NS84 486 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 ARHGAP28Q9P2N2 729 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 ZNRF3Q9ULT6 936 aa20.45■□□□□ 0.86
PTBP1-220ENST00000627714 POTEJP0CG39 1038 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 RRM1P23921 792 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 SNX1Q13596 522 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 PSMD6Q15008 389 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 PARP9Q8IXQ6 854 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.44■□□□□ 0.86
PTBP1-220ENST00000627714 VCPIP1Q96JH7 1222 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 ATP6V0A4Q9HBG4 840 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 MRPL47Q9HD33 250 aaKnown RBP20.44■□□□□ 0.86
PTBP1-220ENST00000627714 WDR81Q562E7 1941 aa20.44■□□□□ 0.86
PTBP1-220ENST00000627714 COL4A5P29400 1685 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms