RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SERPINB8P50452 374 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 MXI1P50539 228 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 LVRNQ6Q4G3 990 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FAM133AQ8N9E0 248 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CALML6Q8TD86 181 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FAR2Q96K12 515 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ACAP3Q96P50 834 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 RABGEF1Q9UJ41 708 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CARMIL3Q8ND23 1372 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CCT8L1PA6NM43 557 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SLC1A1P43005 524 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 KCNA1Q09470 495 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 MB21D1Q8N884 522 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SPATA5Q8NB90 893 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CDC26Q8NHZ8 85 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 KRT35Q92764 455 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 BFARQ9NZS9 450 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DLGAP2Q9P1A6 1054 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 MAN1B1Q9UKM7 699 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 LEMD3Q9Y2U8 911 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SUGT1Q9Y2Z0 365 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SNPHO15079 494 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 USP1O94782 785 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ATP5BP06576 529 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TTKP33981 857 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TAF1CQ15572 869 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ARHGAP17Q68EM7 881 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 RNF139Q8WU17 664 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 OSBPL8Q9BZF1 889 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 PCDHA4Q9UN74 947 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 LRRIQ4A6NIV6 560 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 UBXN8O00124 270 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 MED26O95402 600 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TBXAS1P24557 533 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 PSMA2P25787 234 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ANXA11P50995 505 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CYP4A11Q02928 519 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CYP4A22Q5TCH4 519 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF579Q8NAF0 562 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 PPP1R14BQ96C90 147 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 COPG2Q9UBF2 871 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 IP6K2Q9UHH9 426 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DSEQ9UL01 958 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 C2CD6Q53TS8 623 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 HMG20AQ9NP66 347 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 BTBD7Q9P203 1132 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CTNNAL1Q9UBT7 734 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 BLMP54132 1417 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DDHD2O94830 711 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 AKAP5P24588 427 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ADCY1Q08828 1119 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 FOPNLQ96NB1 174 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TRAPPC9Q96Q05 1148 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DCLRE1BQ9H816 532 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ABHD10Q9NUJ1 306 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ETAA1Q9NY74 926 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DCTN4Q9UJW0 460 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SRPRBQ9Y5M8 271 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TBC1D12O60347 775 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SLC7A5Q01650 507 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 FCHO2Q0JRZ9 810 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TRIP10Q15642 601 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 EEPD1Q7L9B9 569 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 NANOGNBQ7Z5D8 188 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 RMND5BQ96G75 393 aaPredicted RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 NSL1Q96IY1 281 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 TMEM161AQ9NX61 479 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 PRAG1Q86YV5 1406 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 UBN2Q6ZU65 1347 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 FAM170AA1A519 330 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 FAM47DPA6NHR8 397 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 CFAP99D6REC4 459 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 FKBP6O75344 327 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 PSMC3P17980 439 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 C1DQ13901 141 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 ANKRD13CQ8N6S4 541 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 VPS37AQ8NEZ2 397 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 SLC7A3Q8WY07 619 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 APBB2Q92870 758 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 DEPDC7Q96QD5 511 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 LIMA1Q9UHB6 759 aaKnown RBP7.53□□□□□ -1.2
COLCA1-205ENST00000620864 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
COLCA1-205ENST00000620864 O00370 1275 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 PLIN5Q00G26 463 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 STX5Q13190 355 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SVOPQ8N4V2 548 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 DIS3LQ8TF46 1054 aaKnown RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 SMARCAD1Q9H4L7 1026 aa7.52□□□□□ -1.21
COLCA1-205ENST00000620864 KLHL8Q9P2G9 620 aaPredicted RBP7.52□□□□□ -1.21
COLCA1-205ENST00000620864 CDYLQ9Y232 598 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms