RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
TARDBP-218ENST00000617172 PLIN2Q99541 437 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 CLSTN3Q9BQT9 956 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 PLEKHA5Q9HAU0 1116 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 KCNK12Q9HB15 430 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 CNTN3Q9P232 1028 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 EPS15L1Q9UBC2 864 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 CACNG4Q9UBN1 327 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 FBXW11Q9UKB1 542 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 BACE2Q9Y5Z0 518 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 TECTAO75443 2155 aa10.59□□□□□ -0.71
TARDBP-218ENST00000617172 ABLIM1O14639 778 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 SYN3O14994 580 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 XYLBO75191 536 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 POU2F2P09086 479 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 GBP2P32456 591 aaPredicted RBP10.58□□□□□ -0.72
TARDBP-218ENST00000617172 NHLH1Q02575 133 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 MCL1Q07820 350 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 NOLC1Q14978 699 aaKnown RBP eCLIP10.58□□□□□ -0.72
TARDBP-218ENST00000617172 SF3A1Q15459 793 aaKnown RBP10.58□□□□□ -0.72
TARDBP-218ENST00000617172 ARSHQ5FYA8 562 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 HAUS6Q7Z4H7 955 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 RASSF8Q8NHQ8 419 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 INTS4Q96HW7 963 aaKnown RBP10.58□□□□□ -0.72
TARDBP-218ENST00000617172 SNX27Q96L92 541 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 TSPAN18Q96SJ8 248 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 CXCL16Q9H2A7 254 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 PARVGQ9HBI0 331 aa10.58□□□□□ -0.72
TARDBP-218ENST00000617172 VPS37CA5D8V6 355 aaPredicted RBP10.57□□□□□ -0.72
TARDBP-218ENST00000617172 H7C4K7 107 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 PODXLO00592 558 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 FAM13AO94988 1023 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 KRT18P05783 430 aaKnown RBP10.57□□□□□ -0.72
TARDBP-218ENST00000617172 CLTAP09496 248 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MYBP10242 640 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 OR1D2P34982 312 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 DDIT3P35638 169 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MATR3P43243 847 aaKnown RBP eCLIP10.57□□□□□ -0.72
TARDBP-218ENST00000617172 CLCN5P51795 746 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 ZNF131P52739 623 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 NCKAP1LP55160 1127 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 PPM1LQ5SGD2 360 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 IER5LQ5T953 404 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 GPBP1Q86WP2 473 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MYCT1Q8N699 235 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 CEP120Q8N960 986 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 BICD1Q96G01 975 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 ZBTB45Q96K62 511 aaPredicted RBP10.57□□□□□ -0.72
TARDBP-218ENST00000617172 CCSER1Q9C0I3 900 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MFSD1Q9H3U5 465 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 ANKFY1Q9P2R3 1169 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MTRRQ9UBK8 725 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 DUSP12Q9UNI6 340 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
TARDBP-218ENST00000617172 MUC6Q6W4X9 2439 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 WDFY4Q6ZS81 3184 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 XPOTO43592 962 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 TRAK2O60296 914 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 N4BP1O75113 896 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 C8AP07357 584 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 LAMP2P13473 410 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 PAX3P23760 479 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 FSHRP23945 695 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 TKTP29401 623 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 LIG4P49917 911 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 SOX4Q06945 474 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 DHX8Q14562 1220 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 SLC10A6Q3KNW5 377 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 SLC8B1Q6J4K2 584 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 CD300LGQ6UXG3 332 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 SLC44A3Q8N4M1 653 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 C3orf58Q8NDZ4 430 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 APPL2Q8NEU8 664 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 ZNF461Q8TAF7 563 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 FEZF2Q8TBJ5 459 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 LARP4BQ92615 738 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 RAD54LQ92698 747 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 ZMAT2Q96NC0 199 aaKnown RBP10.56□□□□□ -0.72
TARDBP-218ENST00000617172 MYADMQ96S97 322 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 GOLGA2P5Q9HBQ8 144 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 BLOC1S4Q9NUP1 217 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 WNT16Q9UBV4 365 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 CCDC39Q9UFE4 941 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 FBXL21Q9UKT6 434 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 MAFFQ9ULX9 164 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 TBX20Q9UMR3 447 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
TARDBP-218ENST00000617172 TDRD15B5MCY1 1934 aaKnown RBP10.55□□□□□ -0.72
TARDBP-218ENST00000617172 NPHP3-ACAD11A0A0J9YXS1 232 aa10.55□□□□□ -0.72
TARDBP-218ENST00000617172 TTC26A0AVF1 554 aa10.55□□□□□ -0.72
TARDBP-218ENST00000617172 HNRNPDLO14979 420 aaKnown RBP10.55□□□□□ -0.72
TARDBP-218ENST00000617172 ADAM12O43184 909 aa10.55□□□□□ -0.72
TARDBP-218ENST00000617172 TBCAO75347 108 aaKnown RBP10.55□□□□□ -0.72
TARDBP-218ENST00000617172 PIGRP01833 764 aa10.55□□□□□ -0.72
TARDBP-218ENST00000617172 HARSP12081 509 aaKnown RBP10.55□□□□□ -0.72
TARDBP-218ENST00000617172 PLCG1P19174 1290 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms