RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 RHOT1Q8IXI2 618 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 RPUSD2Q8IZ73 545 aaKnown RBP5.66□□□□□ -1.5
CFDP1-211ENST00000612761 FUBP3Q96I24 572 aaKnown RBP eCLIP5.66□□□□□ -1.5
CFDP1-211ENST00000612761 CEP89Q96ST8 783 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 NEU1Q99519 415 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 TTPALQ9BTX7 342 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 TEX101Q9BY14 249 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 IKZF4Q9H2S9 585 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 SLITRK6Q9H5Y7 841 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 TUBD1Q9UJT1 453 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
CFDP1-211ENST00000612761 A0A087X1B8 175 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA12O60330 932 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 AMY1AP04745 511 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 ALAS1P13196 640 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 C5AR1P21730 350 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 EVA1CP58658 441 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PURAQ00577 322 aaKnown RBP5.65□□□□□ -1.5
CFDP1-211ENST00000612761 UBXN2BQ14CS0 331 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 ATP2B3Q16720 1220 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 Q6ZPA2 131 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 ZGPATQ8N5A5 531 aaKnown RBP5.65□□□□□ -1.5
CFDP1-211ENST00000612761 HDAC10Q969S8 669 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 SLC23A1Q9UHI7 598 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA9Q9Y5G4 932 aaKnown RBP5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA8Q9Y5G5 932 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA7Q9Y5G6 932 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA6Q9Y5G7 932 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 PCDHGA3Q9Y5H0 932 aa5.65□□□□□ -1.5
CFDP1-211ENST00000612761 MYBBP1AQ9BQG0 1328 aaKnown RBP5.65□□□□□ -1.51
CFDP1-211ENST00000612761 WASHC2CQ9Y4E1 1318 aa5.65□□□□□ -1.51
CFDP1-211ENST00000612761 CENPVL1A0A0U1RR11 272 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 FOXN1O15353 648 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 LPXNO60711 386 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 KRT4P19013 534 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 DDX6P26196 483 aaKnown RBP eCLIP5.64□□□□□ -1.51
CFDP1-211ENST00000612761 ATP8B2P98198 1209 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 PCBP2Q15366 365 aaKnown RBP eCLIP5.64□□□□□ -1.51
CFDP1-211ENST00000612761 TSHZ3Q63HK5 1081 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 PNMA8AQ86V59 439 aaPredicted RBP5.64□□□□□ -1.51
CFDP1-211ENST00000612761 VRK3Q8IV63 474 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 ARHGEF19Q8IW93 802 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 CPEB3Q8NE35 698 aaKnown RBP5.64□□□□□ -1.51
CFDP1-211ENST00000612761 OR56A1Q8NGH5 318 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 TEKT5Q96M29 485 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 MYOCQ99972 504 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 TDP1Q9NUW8 608 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 KLHL11Q9NVR0 708 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 DKK2Q9UBU2 259 aa5.64□□□□□ -1.51
CFDP1-211ENST00000612761 BICRAQ9NZM4 1560 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 FZD9O00144 591 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 B3GALT2O43825 422 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 CFIP05156 583 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 CCND1P24385 295 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 GUCY1B3Q02153 619 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 CREMQ03060 361 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 FSTL1Q12841 308 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 PTPN21Q16825 1174 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 EFCAB2Q5VUJ9 269 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 ARMC6Q6NXE6 501 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 UBE3BQ7Z3V4 1068 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 RSPH3Q86UC2 560 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 BRINP2Q9C0B6 783 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 RNPEPQ9H4A4 650 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 CYP4F11Q9HBI6 524 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 FBXO34Q9NWN3 711 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 ANKFY1Q9P2R3 1169 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 SPEF1Q9Y4P9 236 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 PCDHA13Q9Y5I0 950 aa5.63□□□□□ -1.51
CFDP1-211ENST00000612761 LOC105371045A0A1W2PR82 267 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 MARCH11A6NNE9 402 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 SUV39H1O43463 412 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 SGTAO43765 313 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-211ENST00000612761 GCSHP23434 173 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 CTXN1P60606 82 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 CDC42EP1Q00587 391 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 KIF23Q02241 960 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-211ENST00000612761 TAP1Q03518 808 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 RESTQ13127 1097 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 PTPROQ16827 1216 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 SPDYE7PQ495Y7 208 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 DACT2Q5SW24 774 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 MAPKAPK5Q8IW41 473 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 WDR11Q9BZH6 1224 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 C11orf54Q9H0W9 315 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-211ENST00000612761 SERHL2Q9H4I8 314 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 MAP3K2Q9Y2U5 619 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 COL4A3Q01955 1670 aa5.62□□□□□ -1.51
CFDP1-211ENST00000612761 A0A1B0GTW7 788 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 CCDC154A6NI56 674 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 UNC119BA6NIH7 251 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 KIAA0391O15091 583 aaKnown RBP5.61□□□□□ -1.51
CFDP1-211ENST00000612761 HTRA2O43464 458 aaPredicted RBP5.61□□□□□ -1.51
CFDP1-211ENST00000612761 RHOBTB3O94955 611 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 TNKSO95271 1327 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 GCP02774 474 aa5.61□□□□□ -1.51
CFDP1-211ENST00000612761 CKBP12277 381 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms