RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CLIC6Q96NY7 704 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 PIDD1Q9HB75 910 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 CNTN3Q9P232 1028 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 EXOC7Q9UPT5 735 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 USTQ9Y2C2 406 aa15.73■□□□□ 0.11
PKNOX1-210ENST00000607049 PPP6R2O75170 966 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 YEATS4O95619 227 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 COL9A1P20849 921 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 CLCNKBP51801 687 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 PPP2R3AQ06190 1150 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 NAB2Q15742 525 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 UPP1Q16831 310 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 XKR4Q5GH76 650 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 LIN9Q5TKA1 542 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 ATL3Q6DD88 541 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 ALKAL1Q6UXT8 129 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 ANKS3Q6ZW76 656 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 OTOP3Q7RTS5 596 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 DYMQ7RTS9 669 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 HVCN1Q96D96 273 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 B3GALT6Q96L58 329 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 TSPAN18Q96SJ8 248 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 POMKQ9H5K3 350 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 CACNG4Q9UBN1 327 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 CFAP45Q9UL16 551 aa15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 TDRD15B5MCY1 1934 aaKnown RBP15.72■□□□□ 0.11
PKNOX1-210ENST00000607049 CCDC195A0A1B0GUA6 201 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 FAM86C2PA6NEL3 165 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 PODXLO00592 558 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 TGM5O43548 720 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 PIGRP01833 764 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 WEE2P0C1S8 567 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 ZSCAN22P10073 491 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 SP100P23497 879 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 GTF2BQ00403 316 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 AMPD3Q01432 767 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 RTP2Q5QGT7 225 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 GLYCTKQ8IVS8 523 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 CD302Q8IX05 232 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 LINC00301Q8NCQ3 95 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 DDX12PQ92771 950 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 EDAQ92838 391 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 MSTO1Q9BUK6 570 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 RHOBTB2Q9BYZ6 727 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 RPF1Q9H9Y2 349 aaKnown RBP15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 ZDHHC7Q9NXF8 308 aa15.71■□□□□ 0.11
PKNOX1-210ENST00000607049 ABLIM1O14639 778 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 OGTO15294 1046 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 IDEP14735 1019 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 RPL17P18621 184 aaKnown RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 ALCAMQ13740 583 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 POSTNQ15063 836 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 FOXD4L5Q5VV16 416 aaPredicted RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 PRSS55Q6UWB4 352 aaPredicted RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 MAP4K3Q8IVH8 894 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 KREMEN2Q8NCW0 462 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 FOXD4L4Q8WXT5 416 aaPredicted RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 SMG7Q92540 1137 aaKnown RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 MFSD14AQ96MC6 490 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 PANK2Q9BZ23 570 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 CUEDC2Q9H467 287 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 ST6GALNAC4Q9H4F1 302 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 TFIP11Q9UBB9 837 aaKnown RBP15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 PCDHB13Q9Y5F0 798 aa15.7■□□□□ 0.1
PKNOX1-210ENST00000607049 H7C4K7 107 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SYN3O14994 580 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 CUTAO60888 179 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 F13A1P00488 732 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SPATA31D3P0C874 917 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 CXCL8P10145 99 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 FGFR3P22607 806 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 NMT1P30419 496 aaKnown RBP15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 MCM4P33991 863 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 MTMR3Q13615 1198 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 PTPN21Q16825 1174 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SLC10A6Q3KNW5 377 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SEZ6Q53EL9 994 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 ADALQ6DHV7 355 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SPATA31D4Q6ZUB0 917 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 SFR1Q86XK3 245 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 CCDC65Q8IXS2 484 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 ZDHHC14Q8IZN3 488 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 PDILTQ8N807 584 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 IQUBQ8NA54 791 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 APPL2Q8NEU8 664 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 LNX1Q8TBB1 728 aaPredicted RBP15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 KIF12Q96FN5 646 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 PYM1Q9BRP8 204 aaKnown RBP15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 CXCL16Q9H2A7 254 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 GOLGA2P5Q9HBQ8 144 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 FAM13BQ9NYF5 915 aa15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
PKNOX1-210ENST00000607049 BACE2Q9Y5Z0 518 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms