RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 C10orf62Q5T681 223 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PDXDC2PQ6P474 469 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 KLHDC10Q6PID8 442 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 HS2ST1Q7LGA3 356 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 KCTD20Q7Z5Y7 419 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 GPR141Q7Z602 305 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ATXN2LQ8WWM7 1075 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 NOX5Q96PH1 765 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 OSBPL6Q9BZF3 934 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 C8orf33Q9H7E9 229 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PLEKHA5Q9HAU0 1116 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ETNK1Q9HBU6 452 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CD209Q9NNX6 404 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 TUBE1Q9UJT0 475 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 NFS1Q9Y697 457 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CHD1O14646 1710 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 MYO3BQ8WXR4 1341 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 FAM237AA0A1B0GTK4 181 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 POLR1CO15160 346 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CTNND1O60716 968 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 EYA4O95677 639 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 RETP07949 1114 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 UBTFL6P0CB48 400 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF3P17036 446 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 GM2AP17900 193 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 KRT2P35908 639 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 RASSF2P50749 326 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 COPAP53621 1224 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 RCAN1P53805 252 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ADKP55263 362 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 HSD17B7P56937 341 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 XIAPP98170 497 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 RALGDSQ12967 914 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 STK38Q15208 465 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 PTPROQ16827 1216 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CCDC58Q4VC31 144 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 IQSEC1Q6DN90 963 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 MIGA2Q7L4E1 593 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 FBXL16Q8N461 479 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 KIF2BQ8N4N8 673 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 SUPT20HQ8NEM7 779 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CEP170P1Q96L14 293 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ANKRD2Q9GZV1 360 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 CNOT8Q9UFF9 292 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 DMGDHQ9UI17 866 aaKnown RBP9.38□□□□□ -0.91
COMMD3-215ENST00000602574 HPS5Q9UPZ3 1129 aa9.38□□□□□ -0.91
COMMD3-215ENST00000602574 ZMYM6O95789 1325 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 MFAP3LO75121 409 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 FUCA1P04066 466 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 A1BGP04217 495 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 SLC3A2P08195 630 aaKnown RBP9.37□□□□□ -0.91
COMMD3-215ENST00000602574 HNF1BP35680 557 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 ME1P48163 572 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 CCT4P50991 539 aaKnown RBP9.37□□□□□ -0.91
COMMD3-215ENST00000602574 PLCD1P51178 756 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF135P52742 658 aaPredicted RBP9.37□□□□□ -0.91
COMMD3-215ENST00000602574 NFIAQ12857 509 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 CAVIN4Q5BKX8 364 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 FLCNQ8NFG4 579 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 KCNG4Q8TDN1 519 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 COQ7Q99807 217 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 TUBA1CQ9BQE3 449 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 ALG1Q9BT22 464 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 APOL5Q9BWW9 433 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 SP140LQ9H930 580 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 PIH1D1Q9NWS0 290 aaKnown RBP9.37□□□□□ -0.91
COMMD3-215ENST00000602574 FNIP2Q9P278 1114 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 GNPTGQ9UJJ9 305 aa9.37□□□□□ -0.91
COMMD3-215ENST00000602574 PNMA6EA0A0J9YXQ4 647 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TEX51A0A1B0GUA7 166 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 C17orf113A0A1B0GUU1 675 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 CLOCKO15516 846 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 LARGE1O95461 756 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 PRLP01236 227 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 HMGN1P05114 100 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 ZNF18P17022 549 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 STX2P32856 288 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 MTHFRP42898 656 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 NUP107P57740 925 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 DSG1Q02413 1049 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TRIM14Q14142 442 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 GRIK5Q16478 980 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 CWF19L2Q2TBE0 894 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TATDN1Q6P1N9 297 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 RANBP10Q6VN20 620 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 STOX1Q6ZVD7 989 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 DCP2Q8IU60 420 aaKnown RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 TICAM1Q8IUC6 712 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
COMMD3-215ENST00000602574 ADSSL1Q8N142 457 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 FSIP1Q8NA03 581 aa9.36□□□□□ -0.91
COMMD3-215ENST00000602574 MINDY2Q8NBR6 621 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms