RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 MRPL17Q9NRX2 175 aaKnown RBP19.11■□□□□ 0.65
IRF3-230ENST00000601809 MTCL1Q9Y4B5 1905 aaKnown RBP19.1■□□□□ 0.65
IRF3-230ENST00000601809 DENND4AQ7Z401 1863 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 SF3B1O75533 1304 aaKnown RBP eCLIP19.1■□□□□ 0.656e-8■■■■■ 54.2
IRF3-230ENST00000601809 OGTO15294 1046 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 TEX28O15482 410 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 PAPLNO95428 1278 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 URODP06132 367 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 CLTAP09496 248 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 CXCL8P10145 99 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 HOXB8P17481 243 aaPredicted RBP19.1■□□□□ 0.65
IRF3-230ENST00000601809 ADSSP30520 456 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 ME1P48163 572 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 EHHADHQ08426 723 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 ENOX2Q16206 610 aaKnown RBP19.1■□□□□ 0.65
IRF3-230ENST00000601809 USP41Q3LFD5 358 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 ADHFE1Q8IWW8 467 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 HASPINQ8TF76 798 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 C18orf25Q96B23 403 aaPredicted RBP19.1■□□□□ 0.65
IRF3-230ENST00000601809 DHX58Q96C10 678 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 BICD1Q96G01 975 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 UROC1Q96N76 676 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 PLEKHA5Q9HAU0 1116 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 FNIP2Q9P278 1114 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 CPSF3Q9UKF6 684 aaKnown RBP19.1■□□□□ 0.65
IRF3-230ENST00000601809 FAM50BQ9Y247 325 aa19.1■□□□□ 0.65
IRF3-230ENST00000601809 FAM237AA0A1B0GTK4 181 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 POLR2DO15514 142 aaKnown RBP19.09■□□□□ 0.65
IRF3-230ENST00000601809 TADA2AO75478 443 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 MYBP10242 640 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
IRF3-230ENST00000601809 DCLRE1AQ6PJP8 1040 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 TMEM130Q8N3G9 435 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 IQUBQ8NA54 791 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 PIK3R5Q8WYR1 880 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 C7orf25Q9BPX7 421 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 PANK4Q9NVE7 773 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 CDH22Q9UJ99 828 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 HPSEQ9Y251 543 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 SSX2IPQ9Y2D8 614 aa19.09■□□□□ 0.65
IRF3-230ENST00000601809 C2orf16Q68DN1 1984 aa19.08■□□□□ 0.65
IRF3-230ENST00000601809 C2CD2LO14523 706 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 C1RP00736 705 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 FGFR3P22607 806 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 KYAT1Q16773 422 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 HERC4Q5GLZ8 1057 aaPredicted RBP19.08■□□□□ 0.64
IRF3-230ENST00000601809 ADALQ6DHV7 355 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 LILRA6Q6PI73 481 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 CRELD2Q6UXH1 353 aaPredicted RBP19.08■□□□□ 0.64
IRF3-230ENST00000601809 PPFIBP1Q86W92 1011 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 GLIS3Q8NEA6 775 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 LNX1Q8TBB1 728 aaPredicted RBP19.08■□□□□ 0.64
IRF3-230ENST00000601809 EMILIN2Q9BXX0 1053 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 MRPL44Q9H9J2 332 aaKnown RBP19.08■□□□□ 0.64
IRF3-230ENST00000601809 MAGEF1Q9HAY2 307 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 SLC38A7Q9NVC3 462 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 DZANK1Q9NVP4 752 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 TBC1D7Q9P0N9 293 aa19.08■□□□□ 0.64
IRF3-230ENST00000601809 LACTBL1A8MY62 500 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 ACTN4O43707 911 aaKnown RBP19.07■□□□□ 0.64
IRF3-230ENST00000601809 SRGAP2BP0DMP2 458 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 IDEP14735 1019 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 LRPAP1P30533 357 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 CA8P35219 290 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 HOXD13P35453 343 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 KRT85P78386 507 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 BECN1Q14457 450 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 KANK3Q6NY19 840 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 PRSS55Q6UWB4 352 aaPredicted RBP19.07■□□□□ 0.64
IRF3-230ENST00000601809 GJD3Q8N144 294 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 FBXL18Q96ME1 805 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 ADAM7Q9H2U9 754 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.07■□□□□ 0.64
IRF3-230ENST00000601809 TUBGCP4Q9UGJ1 667 aa19.07■□□□□ 0.64
IRF3-230ENST00000601809 LOC730098B7Z3J9 87 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 PODXLO00592 558 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 B3GAT3O94766 335 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 CMA1P23946 247 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 KLRC2P26717 231 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 CASP1P29466 404 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 BRCC3P46736 316 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 ELAVL2Q12926 359 aaKnown RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 ALCAMQ13740 583 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 CBX2Q14781 532 aaPredicted RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 FAM171A1Q5VUB5 890 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 EPM2AIP1Q7L775 607 aaPredicted RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 CCDC65Q8IXS2 484 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 C12orf76Q8N812 135 aaPredicted RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 RIN2Q8WYP3 895 aaPredicted RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 HPS3Q969F9 1004 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 DDX27Q96GQ7 796 aaKnown RBP19.06■□□□□ 0.64
IRF3-230ENST00000601809 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 CLSTN3Q9BQT9 956 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 TTPALQ9BTX7 342 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 MSTO1Q9BUK6 570 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 LRRC27Q9C0I9 530 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 FAM13BQ9NYF5 915 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 KCNH3Q9ULD8 1083 aa19.06■□□□□ 0.64
IRF3-230ENST00000601809 TRIOO75962 3097 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms