RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CDT1Q9H211 546 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 LIMD1Q9UGP4 676 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 ODF2LQ9ULJ1 636 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PCDHB8Q9UN66 801 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PCDHB13Q9Y5F0 798 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 BACE2Q9Y5Z0 518 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 TRIOO75962 3097 aa8.33□□□□□ -1.08
NPC1-208ENST00000590301 PLXNA4Q9HCM2 1894 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 SMIM28A0A1B0GU29 152 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 XYLBO75191 536 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 EDN1P05305 212 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 PLA2G4BP0C869 781 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 FGFR3P22607 806 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CDC25AP30304 524 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 AVPR2P30518 371 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 RPL9P32969 192 aaKnown RBP8.32□□□□□ -1.08
NPC1-208ENST00000590301 UBA7P41226 1012 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CLCN5P51795 746 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 SLC12A3P55017 1021 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 RAB33AQ14088 237 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 ZRSR1Q15695 479 aaKnown RBP8.32□□□□□ -1.08
NPC1-208ENST00000590301 UPP1Q16831 310 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 UVSSAQ2YD98 709 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 ALKAL1Q6UXT8 129 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 ANKS3Q6ZW76 656 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CEP57Q86XR8 500 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CALML4Q96GE6 196 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 B3GALT6Q96L58 329 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 SNX27Q96L92 541 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 ACAP3Q96P50 834 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 PNMA5Q96PV4 448 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CLSTN3Q9BQT9 956 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 PAAF1Q9BRP4 392 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 TARS2Q9BW92 718 aaKnown RBP8.32□□□□□ -1.08
NPC1-208ENST00000590301 PLEKHA5Q9HAU0 1116 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 KCNK12Q9HB15 430 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 MTRRQ9UBK8 725 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 FBXW11Q9UKB1 542 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 DUSP12Q9UNI6 340 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 USP20Q9Y2K6 914 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 EVPLQ92817 2033 aa8.32□□□□□ -1.08
NPC1-208ENST00000590301 H7C4K7 107 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 ABLIM1O14639 778 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 SYN3O14994 580 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 SLC16A4O15374 487 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 CLDN3O15551 220 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 RFPL2O75678 378 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 CD2BP2O95400 341 aaKnown RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 ASGR2P07307 311 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 CLTAP09496 248 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 MAPTP10636 758 aaKnown RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 RPL17P18621 184 aaKnown RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 PAX3P23760 479 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 GBP2P32456 591 aaPredicted RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 CLCNKBP51801 687 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 MCL1Q07820 350 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 CUL4AQ13619 759 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 NOLC1Q14978 699 aaKnown RBP eCLIP8.31□□□□□ -1.08
NPC1-208ENST00000590301 GLRA4Q5JXX5 417 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 PPM1LQ5SGD2 360 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 ASTLQ6HA08 431 aaPredicted RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 PRSS55Q6UWB4 352 aaPredicted RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 TAS1R3Q7RTX0 852 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 PRSS33Q8NF86 280 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 HASPINQ8TF76 798 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 RABGGTAQ92696 567 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
NPC1-208ENST00000590301 MFSD1Q9H3U5 465 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 POLD4Q9HCU8 107 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 MAFFQ9ULX9 164 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 WDR81Q562E7 1941 aa8.31□□□□□ -1.08
NPC1-208ENST00000590301 C5orf42Q9H799 3197 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 PODXLO00592 558 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 TRIM66O15016 1216 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 XPOTO43592 962 aaKnown RBP8.3□□□□□ -1.08
NPC1-208ENST00000590301 PIGRP01833 764 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 C8AP07357 584 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 SPATA31D3P0C874 917 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 SRFP11831 508 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 LAMP2P13473 410 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 FSHRP23945 695 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 OR1D2P34982 312 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 ZNF131P52739 623 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 NCKAP1LP55160 1127 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 ARSHQ5FYA8 562 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 IER5LQ5T953 404 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 SLC8B1Q6J4K2 584 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 SPATA31D4Q6ZUB0 917 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 HAUS6Q7Z4H7 955 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 GPBP1Q86WP2 473 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 GLYCTKQ8IVS8 523 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 CEP120Q8N960 986 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 APPL2Q8NEU8 664 aa8.3□□□□□ -1.08
NPC1-208ENST00000590301 RASSF8Q8NHQ8 419 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms