RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ADAMTS10Q9H324 1103 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 C11orf49Q9H6J7 331 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 L2HGDHQ9H9P8 463 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 PDE11AQ9HCR9 933 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 MYO1AQ9UBC5 1043 aa22.08■■□□□ 1.13
ATG4D-204ENST00000586417 A0A087X0T9 212 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 PQBP1O60828 265 aaKnown RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 GFPT2O94808 682 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 FAM228BP0C875 321 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 ENOX2Q16206 610 aaKnown RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 AMHR2Q16671 573 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 FAM187BQ17R55 369 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 SEZ6Q53EL9 994 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 OLIG1Q8TAK6 271 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 NLRP7Q8WX94 980 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 UBE2TQ9NPD8 197 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 GUCA1BQ9UMX6 200 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 EVI5O60447 810 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 HARSP12081 509 aaKnown RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 CASQ1P31415 396 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 PTK7Q13308 1070 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 PRPF4BQ13523 1007 aaKnown RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 TRIM71Q2Q1W2 868 aaKnown RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 ZNF569Q5MCW4 686 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 ATF7IP2Q5U623 682 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 MPZL3Q6UWV2 235 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 ZBTB33Q86T24 672 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 BRSK2Q8IWQ3 736 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 PRMT7Q9NVM4 692 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-204ENST00000586417 RAB20Q9NX57 234 aa22.07■■□□□ 1.12
ATG4D-204ENST00000586417 OGTO15294 1046 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 KRT86O43790 486 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 CD4P01730 458 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 TNFSF9P41273 254 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 ARHGAP44Q17R89 818 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 ZACNQ401N2 412 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 TRIM60Q495X7 471 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 LMBRD2Q68DH5 695 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-204ENST00000586417 SLC35F6Q8N357 371 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 NME8Q8N427 588 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 FNBP1Q96RU3 617 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 TCHPQ9BT92 498 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 ADAMTS1Q9UHI8 967 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 DUSP10Q9Y6W6 482 aa22.06■■□□□ 1.12
ATG4D-204ENST00000586417 UQCRHLA0A096LP55 91 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 TULP1O00294 542 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-204ENST00000586417 PJA2O43164 708 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 C4BPAP04003 597 aaKnown RBP22.05■■□□□ 1.12
ATG4D-204ENST00000586417 UQCRHP07919 91 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 CTSHP09668 335 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 ANXA13P27216 316 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 GTF2F1P35269 517 aaKnown RBP eCLIP22.05■■□□□ 1.12
ATG4D-204ENST00000586417 THPOP40225 353 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 MAGEA1P43355 309 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 SNX17Q15036 470 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 EEF1DP3Q658K8 133 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 NECAB2Q7Z6G3 386 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 KAT5Q92993 513 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 KREMEN1Q96MU8 473 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 SCLT1Q96NL6 688 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 OSMRQ99650 979 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 CGRRF1Q99675 332 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 SYT11Q9BT88 431 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 CPSF3Q9UKF6 684 aaKnown RBP22.05■■□□□ 1.12
ATG4D-204ENST00000586417 NENFQ9UMX5 172 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 TNFSF13BQ9Y275 285 aa22.05■■□□□ 1.12
ATG4D-204ENST00000586417 FOXN3O00409 490 aaPredicted RBP22.04■■□□□ 1.12
ATG4D-204ENST00000586417 CHRNA1P02708 482 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 MRPS6P82932 125 aaKnown RBP22.04■■□□□ 1.12
ATG4D-204ENST00000586417 TLE2Q04725 743 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 KIF5AQ12840 1032 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 LRRC26Q2I0M4 334 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 TDRD10Q5VZ19 366 aaKnown RBP22.04■■□□□ 1.12
ATG4D-204ENST00000586417 UBE2Q1Q7Z7E8 422 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 HELQQ8TDG4 1101 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 TMEM40Q8WWA1 233 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 SEZ6LQ9BYH1 1024 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 TSGA10Q9BZW7 698 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 TNNI1P19237 187 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 ZNF568Q3ZCX4 644 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 ANKRD33Q7Z3H0 272 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 RPAINQ86UA6 219 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 ZNF410Q86VK4 478 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 FMNL3Q8IVF7 1028 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.04■■□□□ 1.12
ATG4D-204ENST00000586417 OSBPL7Q9BZF2 842 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 CDT1Q9H211 546 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.04■■□□□ 1.121e-7■■■■■ 271.5
ATG4D-204ENST00000586417 CDY2AQ9Y6F7 541 aa22.04■■□□□ 1.12
ATG4D-204ENST00000586417 FGFR4P22455 802 aa22.03■■□□□ 1.12
ATG4D-204ENST00000586417 C1orf53Q5VUE5 145 aa22.03■■□□□ 1.12
ATG4D-204ENST00000586417 RSPH3Q86UC2 560 aa22.03■■□□□ 1.12
ATG4D-204ENST00000586417 NT5C1BQ96P26 610 aa22.03■■□□□ 1.12
ATG4D-204ENST00000586417 CELF4Q9BZC1 486 aaKnown RBP22.03■■□□□ 1.12
ATG4D-204ENST00000586417 ATP11BQ9Y2G3 1177 aa22.03■■□□□ 1.12
ATG4D-204ENST00000586417 ZC3H11AO75152 810 aaKnown RBP eCLIP22.02■■□□□ 1.12
ATG4D-204ENST00000586417 VNN1O95497 513 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 MGAT3Q09327 533 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 FAAP100Q0VG06 881 aa22.02■■□□□ 1.12
ATG4D-204ENST00000586417 ZNF618Q5T7W0 954 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms