RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 PCNX4Q63HM2 1172 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 LBX2Q6XYB7 198 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 DHX32Q7L7V1 743 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ZC3H18Q86VM9 953 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 LCORLQ8N3X6 602 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 RAET1EQ8TD07 263 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PLEKHO2Q8TD55 490 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GIPC2Q8TF65 315 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 COA7Q96BR5 231 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 SNF8Q96H20 258 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PURBQ96QR8 312 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 CNOT8Q9UFF9 292 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 SEC63Q9UGP8 760 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ZNHIT2Q9UHR6 403 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 RLFQ13129 1914 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 FAM25EA8MYX2 175 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 FAM47E-STBD1D6RA91 191 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GLRX3O76003 335 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 UNC5CO95185 931 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GDF11O95390 407 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GJB6O95452 261 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 LIFRP42702 1097 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ACADSBP45954 432 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 MXI1P50539 228 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PLCD1P51178 756 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 GALK1P51570 392 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 EIF3BP55884 814 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 UBXN2AP68543 259 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ZNF844Q08AG5 666 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 KRT32Q14532 448 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 PRPF38BQ5VTL8 546 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 LRRC8BQ6P9F7 803 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 TRIM67Q6ZTA4 783 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 C14orf80Q86SX3 495 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 VPS36Q86VN1 386 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 CYP4X1Q8N118 509 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 TTC30BQ8N4P2 665 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 TLCD1Q96CP7 247 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ELAC2Q9BQ52 826 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 THAP9Q9H5L6 903 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ZNF304Q9HCX3 659 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 MCM9Q9NXL9 1143 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 SEPT10Q9P0V9 454 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ADD3Q9UEY8 706 aaKnown RBP10.58□□□□□ -0.72
ZNF540-203ENST00000586134 NFU1Q9UMS0 254 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ARL2BPQ9Y2Y0 163 aa10.58□□□□□ -0.72
ZNF540-203ENST00000586134 ZNF236Q9UL36 1845 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 A0A088AWK7 358 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 SH3PXD2BA1X283 911 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 TNPO2O14787 897 aaKnown RBP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 JAK2O60674 1132 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 ZBED1O96006 694 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 GYPCP04921 128 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 KRT4P19013 534 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 AP1B1Q10567 949 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 PTPN21Q16825 1174 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 ZNF423Q2M1K9 1284 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 ZCWPW2Q504Y3 356 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 HSP90AA5PQ58FG0 334 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 DDX42Q86XP3 938 aaKnown RBP eCLIP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 KIF2BQ8N4N8 673 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 FAM133AQ8N9E0 248 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 PIP4K2CQ8TBX8 421 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 EDC3Q96F86 508 aaKnown RBP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 DDX23Q9BUQ8 820 aaKnown RBP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 EMILIN3Q9NT22 766 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 NOVA2Q9UNW9 492 aaKnown RBP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 HPSEQ9Y251 543 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 HYOU1Q9Y4L1 999 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 CAPN6Q9Y6Q1 641 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L15C9J2P7 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L13C9JLJ4 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L11C9JVI0 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L18D6R9N7 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L22D6RA61 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L17D6RBQ6 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L19D6RCP7 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L20D6RJB6 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 HIP1O00291 1037 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 KMOO15229 486 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 FAM153BP0C7A2 387 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 RASA1P20936 1047 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 CARSP49589 748 aaKnown RBP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 HERVK_113P62684 666 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 PRKCZQ05513 592 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 USP17L24Q0WX57 530 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 CUL1Q13616 776 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 NONOQ15233 471 aaKnown RBP eCLIP10.57□□□□□ -0.72
ZNF540-203ENST00000586134 CCDC6Q16204 474 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 FAM153CQ494X1 144 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 SBK1Q52WX2 424 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 C12orf60Q5U649 245 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 SNX30Q5VWJ9 437 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 KLHL35Q6PF15 583 aa10.57□□□□□ -0.72
ZNF540-203ENST00000586134 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms