RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CCDC149Q6ZUS6 474 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.25
SS18-225ENST00000585121 CMASQ8NFW8 434 aaPredicted RBP13.52□□□□□ -0.25
SS18-225ENST00000585121 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 EDAQ92838 391 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 KCNN1Q92952 543 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 ACSF2Q96CM8 615 aaPredicted RBP13.52□□□□□ -0.25
SS18-225ENST00000585121 CNTN3Q9P232 1028 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 CDH22Q9UJ99 828 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 HCN4Q9Y3Q4 1203 aa13.52□□□□□ -0.25
SS18-225ENST00000585121 CCDC195A0A1B0GUA6 201 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 PODXLO00592 558 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 TGM5O43548 720 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
SS18-225ENST00000585121 STAT6P42226 847 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
SS18-225ENST00000585121 PRSS55Q6UWB4 352 aaPredicted RBP13.51□□□□□ -0.25
SS18-225ENST00000585121 OTOP3Q7RTS5 596 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 PLEKHA5Q9HAU0 1116 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 PIDD1Q9HB75 910 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 GOLGA2P5Q9HBQ8 144 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 C11orf16Q9NQ32 467 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 USTQ9Y2C2 406 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
SS18-225ENST00000585121 C2CD4DB7Z1M9 353 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 SPTLC2O15270 562 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 XPOTO43592 962 aaKnown RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 PIGRP01833 764 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 SPATA31D3P0C874 917 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 GAP43P17677 238 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 RPL17P18621 184 aaKnown RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 ZXDAP98168 799 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 SPATA31D4Q6ZUB0 917 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 LINC00301Q8NCQ3 95 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 KREMEN2Q8NCW0 462 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 DDX12PQ92771 950 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 STAMQ92783 540 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 PANK2Q9BZ23 570 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
SS18-225ENST00000585121 ZDHHC7Q9NXF8 308 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 SEL1LQ9UBV2 794 aa13.5□□□□□ -0.25
SS18-225ENST00000585121 OGTO15294 1046 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 PPP6R2O75170 966 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 ZSCAN22P10073 491 aaPredicted RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 MYBP10242 640 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 FGFR3P22607 806 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 NMT1P30419 496 aaKnown RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 GTF2BQ00403 316 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 PPP2R3AQ06190 1150 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 PTPN21Q16825 1174 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 SLC10A6Q3KNW5 377 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 LIN9Q5TKA1 542 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 SLFN12LQ6IEE8 588 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 LILRA6Q6PI73 481 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 MAP4K3Q8IVH8 894 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 ZDHHC14Q8IZN3 488 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 SMG7Q92540 1137 aaKnown RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 ZMAT2Q96NC0 199 aaKnown RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 TSPAN18Q96SJ8 248 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 CLSTN3Q9BQT9 956 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 MSTO1Q9BUK6 570 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 RHOBTB2Q9BYZ6 727 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 LRRC27Q9C0I9 530 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 RFPL2O75678 378 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 YEATS4O95619 227 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 CXCL8P10145 99 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 SOX4Q06945 474 aaPredicted RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 CD302Q8IX05 232 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 HVCN1Q96D96 273 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 KIF12Q96FN5 646 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 MFSD14AQ96MC6 490 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 ST6GALNAC4Q9H4F1 302 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 MRPL44Q9H9J2 332 aaKnown RBP13.49□□□□□ -0.25
SS18-225ENST00000585121 EXOC7Q9UPT5 735 aa13.49□□□□□ -0.25
SS18-225ENST00000585121 MYMKA6NI61 221 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 H7C4K7 107 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 SYN3O14994 580 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 ZMYND10O75800 440 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 IDEP14735 1019 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 CYP3A5P20815 502 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 TKTP29401 623 aaKnown RBP13.48□□□□□ -0.25
SS18-225ENST00000585121 OR1D2P34982 312 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 BRCC3P46736 316 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 POSTNQ15063 836 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 PPM1LQ5SGD2 360 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 ZNF720Q7Z2F6 126 aa13.48□□□□□ -0.25
SS18-225ENST00000585121 SFR1Q86XK3 245 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms