RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	CCDC94	Q9BW85	323 aa	Predicted RBP	14.57	□□□□□ -0.08
SREBF1-223	ENST00000584760	GPR62	Q9BZJ7	368 aa		14.57	□□□□□ -0.08
SREBF1-223	ENST00000584760	ADAM7	Q9H2U9	754 aa		14.57	□□□□□ -0.08
SREBF1-223	ENST00000584760	TOPORS	Q9NS56	1045 aa	Predicted RBP	14.57	□□□□□ -0.08
SREBF1-223	ENST00000584760	CHST7	Q9NS84	486 aa		14.57	□□□□□ -0.08
SREBF1-223	ENST00000584760	MYMK	A6NI61	221 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	TRAK2	O60296	914 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	PIGR	P01833	764 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	ASGR2	P07307	311 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	CNP	P09543	421 aa	Known RBP	14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	HARS	P12081	509 aa	Known RBP	14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	EPCAM	P16422	314 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	NBL1	P41271	181 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	STAT6	P42226	847 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	OSTN	P61366	133 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	DSG1	Q02413	1049 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	ITIH3	Q06033	890 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	MCL1	Q07820	350 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	KIAA0319	Q5VV43	1072 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	NECTIN4	Q96NY8	510 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	TCHP	Q9BT92	498 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	HAPLN2	Q9GZV7	340 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	MFSD1	Q9H3U5	465 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	MRPL17	Q9NRX2	175 aa	Known RBP	14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	LIMD1	Q9UGP4	676 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	TBX20	Q9UMR3	447 aa		14.56	□□□□□ -0.08
SREBF1-223	ENST00000584760	SF3B1	O75533	1304 aa	Known RBP eCLIP	14.56	□□□□□ -0.08	4e-8	■■■■■ 31.8
SREBF1-223	ENST00000584760	C2CD2L	O14523	706 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	HNRNPDL	O14979	420 aa	Known RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	YARS	P54577	528 aa	Known RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	GTF2B	Q00403	316 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	SOX4	Q06945	474 aa	Predicted RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	RARS2	Q5T160	578 aa	Known RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	AXDND1	Q5T1B0	1012 aa	Predicted RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	ASTL	Q6HA08	431 aa	Predicted RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	KANK3	Q6NY19	840 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	DYM	Q7RTS9	669 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	FRMD5	Q7Z6J6	570 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	SFR1	Q86XK3	245 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	MAP4K3	Q8IVH8	894 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	C12orf76	Q8N812	135 aa	Predicted RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	HASPIN	Q8TF76	798 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	DDX12P	Q92771	950 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	DNAJC19	Q96DA6	116 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	BICD1	Q96G01	975 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	B3GALT6	Q96L58	329 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	ZMAT2	Q96NC0	199 aa	Known RBP	14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	KLHL5	Q96PQ7	755 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	EMILIN2	Q9BXX0	1053 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	ST6GALNAC4	Q9H4F1	302 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	ZHX3	Q9H4I2	956 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	CNTN3	Q9P232	1028 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	SSX2IP	Q9Y2D8	614 aa		14.55	□□□□□ -0.08
SREBF1-223	ENST00000584760	CACNA1H	O95180	2353 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SMIM28	A0A1B0GU29	152 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	TMEM189-UBE2V1	I3L0A0	370 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	TEX28	O15482	410 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	CLDN3	O15551	220 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	FAM189A1	O60320	539 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	CUTA	O60888	179 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	PPP1R37	O75864	691 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	KCNE1	P15382	129 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	NMT1	P30419	496 aa	Known RBP	14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	MTHFR	P42898	656 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	CLCN4	P51793	760 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	E2F4	Q16254	413 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SEZ6	Q53EL9	994 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	ATL3	Q6DD88	541 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SLC39A4	Q6P5W5	647 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SHC4	Q6S5L8	630 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	FOXD4L3	Q6VB84	417 aa	Predicted RBP	14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SV2B	Q7L1I2	683 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	PPFIBP1	Q86W92	1011 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	GPR65	Q8IYL9	337 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	PDILT	Q8N807	584 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	TMEM87A	Q8NBN3	555 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	KCNG4	Q8TDN1	519 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	NKD2	Q969F2	451 aa	Predicted RBP	14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	ACAP3	Q96P50	834 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	GOLGA2P5	Q9HBQ8	144 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	RXFP1	Q9HBX9	757 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	DZANK1	Q9NVP4	752 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	SEL1L	Q9UBV2	794 aa		14.54	□□□□□ -0.08
SREBF1-223	ENST00000584760	FRMD3	A2A2Y4	597 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	TADA2A	O75478	443 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	ADH1A	P07327	375 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	CXCL8	P10145	99 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	IGFBP6	P24592	240 aa	Predicted RBP	14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	KLRC2	P26717	231 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	ABCD1	P33897	745 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	LIG4	P49917	911 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	CLCNKB	P51801	687 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	UPP1	Q16831	310 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	SLC10A6	Q3KNW5	377 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	USP41	Q3LFD5	358 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	RTP2	Q5QGT7	225 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	ATAT1	Q5SQI0	421 aa		14.53	□□□□□ -0.08
SREBF1-223	ENST00000584760	KIAA1841	Q6NSI8	718 aa		14.53	□□□□□ -0.08

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