RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SHC4Q6S5L8 630 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 RASGRP4Q8TDF6 673 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 SLC7A3Q8WY07 619 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 TOP1MTQ969P6 601 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 PABPC5Q96DU9 382 aaKnown RBP11.39□□□□□ -0.59
SS18-221ENST00000582448 CLIC6Q96NY7 704 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 USP25Q9UHP3 1055 aa11.39□□□□□ -0.59
SS18-221ENST00000582448 A0A1W2PP55 124 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 MARCH6O60337 910 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 NEMFO60524 1076 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 FOSP01100 380 aaPredicted RBP11.38□□□□□ -0.59
SS18-221ENST00000582448 SMIM10L2AP0DMW4 78 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 SMIM10L2BP0DMW5 78 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
SS18-221ENST00000582448 HOXA13P31271 388 aaPredicted RBP11.38□□□□□ -0.59
SS18-221ENST00000582448 CTNNB1P35222 781 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 PRPHP41219 470 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 SP2Q02086 613 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 ZP2Q05996 745 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 AP3B2Q13367 1082 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 TMEM266Q2M3C6 531 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 LETM2Q2VYF4 491 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 SERINC5Q86VE9 423 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 ADHFE1Q8IWW8 467 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 CEP57L1Q8IYX8 460 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 FIBCD1Q8N539 461 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 RASSF8Q8NHQ8 419 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 ASAP3Q8TDY4 903 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 TBCKQ8TEA7 893 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 UBL7Q96S82 380 aaPredicted RBP11.38□□□□□ -0.59
SS18-221ENST00000582448 IFIH1Q9BYX4 1025 aaKnown RBP11.38□□□□□ -0.59
SS18-221ENST00000582448 RAB34Q9BZG1 259 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 RNPEPQ9H4A4 650 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 EHMT1Q9H9B1 1298 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 OSGEPQ9NPF4 335 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 HPSEQ9Y251 543 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 TRANK1O15050 2925 aa11.38□□□□□ -0.59
SS18-221ENST00000582448 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 MYH6P13533 1939 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.37□□□□□ -0.59
SS18-221ENST00000582448 NOP56O00567 594 aaKnown RBP11.37□□□□□ -0.59
SS18-221ENST00000582448 OR52Z1P0C646 297 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 GLB1P16278 677 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 DUOXA2Q1HG44 320 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 UTP14CQ5TAP6 766 aaKnown RBP11.37□□□□□ -0.59
SS18-221ENST00000582448 KRBA2Q6ZNG9 492 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
SS18-221ENST00000582448 AK8Q96MA6 479 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 PDCD2LQ9BRP1 358 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 C16orf70Q9BSU1 422 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 MAF1Q9H063 256 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 CCDC39Q9UFE4 941 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 MUTYHQ9UIF7 546 aa11.37□□□□□ -0.59
SS18-221ENST00000582448 MUC6Q6W4X9 2439 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 GRM6O15303 877 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 POLR2DO15514 142 aaKnown RBP11.36□□□□□ -0.59
SS18-221ENST00000582448 PPP1R11O60927 126 aaPredicted RBP11.36□□□□□ -0.59
SS18-221ENST00000582448 SMC2O95347 1197 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 LGALS2P05162 132 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 UBA1P22314 1058 aaKnown RBP11.36□□□□□ -0.59
SS18-221ENST00000582448 CCND2P30279 289 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.59
SS18-221ENST00000582448 UBA7P41226 1012 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 TPM4P67936 248 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 SP4Q02446 784 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 DLX2Q07687 328 aaPredicted RBP11.36□□□□□ -0.59
SS18-221ENST00000582448 PGM5Q15124 567 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 KCNV1Q6PIU1 500 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 IQUBQ8NA54 791 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 IL31RAQ8NI17 732 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 MFSD14AQ96MC6 490 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 TCF12Q99081 682 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 NIF3L1Q9GZT8 377 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 PRKAG3Q9UGI9 489 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 TCHHQ07283 1943 aa11.36□□□□□ -0.59
SS18-221ENST00000582448 SIP14410 1827 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 GNAT1P11488 350 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 LTBRP36941 435 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 HSD17B4P51659 736 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 USP11P51784 963 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 NLRP12P59046 1061 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 CCDC173Q0VFZ6 552 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 HYAL1Q12794 435 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 CALCRLQ16602 461 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 UBE2SQ16763 222 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 ANO6Q4KMQ2 910 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
SS18-221ENST00000582448 PPP4R3AQ6IN85 833 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms