RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 ODF1Q14990 250 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 UBXN2BQ14CS0 331 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 BEAN1Q3B7T3 259 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 TIGD2Q4W5G0 525 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 BRDTQ58F21 947 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 ZNF529Q6P280 563 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 MED25Q71SY5 747 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 MIGA2Q7L4E1 593 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 PNMA8AQ86V59 439 aaPredicted RBP5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 HDAC10Q969S8 669 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 COA7Q96BR5 231 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 SMAD5Q99717 465 aaKnown RBP5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 DKK2Q9UBU2 259 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 LIMCH1Q9UPQ0 1083 aa5.4□□□□□ -1.54
TRAPPC8-205ENST00000578658 ABHD16AO95870 558 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 POMCP01189 267 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 SPATA31D3P0C874 917 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 IBSPP21815 317 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 HMGA2P52926 109 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 CDC42EP1Q00587 391 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 KIF23Q02241 960 aaPredicted RBP5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 DPTQ07507 201 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 TARDBPQ13148 414 aaKnown RBP eCLIP5.39□□□□□ -1.553e-10■■■■□ 20.6
TRAPPC8-205ENST00000578658 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 LY6G5CQ5SRR4 150 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 EFCAB2Q5VUJ9 269 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 SPATA31D4Q6ZUB0 917 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 LDLRAD3Q86YD5 345 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 OR56A1Q8NGH5 318 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 PROKR1Q8TCW9 393 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 PHACTR3Q96KR7 559 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 PRRX2Q99811 253 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 TDP1Q9NUW8 608 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 FBXO34Q9NWN3 711 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 SERPINB13Q9UIV8 391 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 RUVBL1Q9Y265 456 aaKnown RBP5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 PCDHA13Q9Y5I0 950 aa5.39□□□□□ -1.55
TRAPPC8-205ENST00000578658 CENPVL1A0A0U1RR11 272 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 CCDC154A6NI56 674 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 SGTAO43765 313 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 LPXNO60711 386 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 NDUFA10O95299 355 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 KRT4P19013 534 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 SLC6A2P23975 617 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 BMPR1AP36894 532 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 ADKP55263 362 aaKnown RBP5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 CTXN1P60606 82 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 DACT2Q5SW24 774 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 KCNV1Q6PIU1 500 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 UBE3BQ7Z3V4 1068 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 DCBLD1Q8N8Z6 715 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 IFI44Q8TCB0 444 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 RAB24Q969Q5 203 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 KLHL11Q9NVR0 708 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 ATP11BQ9Y2G3 1177 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 FPGT-TNNI3KV9GXZ4 949 aa5.38□□□□□ -1.55
TRAPPC8-205ENST00000578658 PRSS23O95084 383 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 ZRANB2O95218 330 aaKnown RBP eCLIP5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 CFIP05156 583 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 ALAS1P13196 640 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 GCSHP23434 173 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 INHBCP55103 352 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 TGFB2P61812 414 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 IL10RAQ13651 578 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 ARHGEF19Q8IW93 802 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 TMX3Q96JJ7 454 aa5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 REXO4Q9GZR2 422 aaKnown RBP5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.37□□□□□ -1.55
TRAPPC8-205ENST00000578658 TCRBV7S2A1N4TA0A589 114 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 ELANEP08246 267 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 CCND1P24385 295 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 DDX6P26196 483 aaKnown RBP eCLIP5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 RECQLP46063 649 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 EXOSC10Q01780 885 aaKnown RBP5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 PTPAQ15257 358 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 UAP1L1Q3KQV9 507 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 TSHZ3Q63HK5 1081 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 PCSK4Q6UW60 755 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 MRGPRGQ86SM5 289 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 RSPH3Q86UC2 560 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 VRK3Q8IV63 474 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 CPEB3Q8NE35 698 aaKnown RBP5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 CHFRQ96EP1 664 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 MRGPRX4Q96LA9 322 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 ADAM2Q99965 735 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 C11orf54Q9H0W9 315 aaPredicted RBP5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 MAP3K2Q9Y2U5 619 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 PCDHB1Q9Y5F3 818 aa5.36□□□□□ -1.55
TRAPPC8-205ENST00000578658 WDR33Q9C0J8 1336 aaKnown RBP5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 hCG_2014768A0A024R1R8 64 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 A0A1B0GTW7 788 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 TMEM191CA6NGB0 347 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 FOXN1O15353 648 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 HLA-DOAP06340 250 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 SLC6A4P31645 630 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 CREMQ03060 361 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 OCA2Q04671 838 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 ATP2B3Q16720 1220 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 TMEM240Q5SV17 173 aa5.35□□□□□ -1.55
TRAPPC8-205ENST00000578658 ARMC6Q6NXE6 501 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms