RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 AEBP2Q6ZN18 517 aaPredicted RBP23.8■■□□□ 1.4
TRAPPC8-205ENST00000578658 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
TRAPPC8-205ENST00000578658 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
TRAPPC8-205ENST00000578658 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC8-205ENST00000578658 FOXD1Q16676 465 aa18.77■□□□□ 0.6
TRAPPC8-205ENST00000578658 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
TRAPPC8-205ENST00000578658 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
TRAPPC8-205ENST00000578658 ADRA2BP18089 450 aa17.95■□□□□ 0.46
TRAPPC8-205ENST00000578658 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC8-205ENST00000578658 MSH5O43196 834 aa17.34■□□□□ 0.37
TRAPPC8-205ENST00000578658 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
TRAPPC8-205ENST00000578658 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
TRAPPC8-205ENST00000578658 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC8-205ENST00000578658 DMRT2Q9Y5R5 561 aa16.12■□□□□ 0.17
TRAPPC8-205ENST00000578658 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
TRAPPC8-205ENST00000578658 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
TRAPPC8-205ENST00000578658 KCNA4P22459 653 aa16.01■□□□□ 0.15
TRAPPC8-205ENST00000578658 POTEDQ86YR6 584 aa15.96■□□□□ 0.15
TRAPPC8-205ENST00000578658 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
TRAPPC8-205ENST00000578658 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
TRAPPC8-205ENST00000578658 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC8-205ENST00000578658 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
TRAPPC8-205ENST00000578658 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
TRAPPC8-205ENST00000578658 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
TRAPPC8-205ENST00000578658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.012e-7■□□□□ 8
TRAPPC8-205ENST00000578658 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
TRAPPC8-205ENST00000578658 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
TRAPPC8-205ENST00000578658 FOXD4L1Q9NU39 408 aa14.77□□□□□ -0.05
TRAPPC8-205ENST00000578658 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC8-205ENST00000578658 ZBTB22O15209 634 aa14.75□□□□□ -0.05
TRAPPC8-205ENST00000578658 C1QBPQ07021 282 aaKnown RBP14.67□□□□□ -0.06
TRAPPC8-205ENST00000578658 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
TRAPPC8-205ENST00000578658 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC8-205ENST00000578658 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
TRAPPC8-205ENST00000578658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
TRAPPC8-205ENST00000578658 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
TRAPPC8-205ENST00000578658 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC8-205ENST00000578658 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
TRAPPC8-205ENST00000578658 APLP2Q06481 763 aa14.38□□□□□ -0.11
TRAPPC8-205ENST00000578658 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC8-205ENST00000578658 CAPN15O75808 1086 aa14.29□□□□□ -0.12
TRAPPC8-205ENST00000578658 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
TRAPPC8-205ENST00000578658 ATF5Q9Y2D1 282 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC8-205ENST00000578658 ZNF219Q9P2Y4 722 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC8-205ENST00000578658 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC8-205ENST00000578658 DSG3P32926 999 aa14.1□□□□□ -0.15
TRAPPC8-205ENST00000578658 ABCB7O75027 752 aa14.01□□□□□ -0.17
TRAPPC8-205ENST00000578658 POLA2Q14181 598 aa13.96□□□□□ -0.17
TRAPPC8-205ENST00000578658 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC8-205ENST00000578658 FBLN2P98095 1184 aa13.62□□□□□ -0.23
TRAPPC8-205ENST00000578658 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC8-205ENST00000578658 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
TRAPPC8-205ENST00000578658 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
TRAPPC8-205ENST00000578658 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
TRAPPC8-205ENST00000578658 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
TRAPPC8-205ENST00000578658 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
TRAPPC8-205ENST00000578658 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC8-205ENST00000578658 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
TRAPPC8-205ENST00000578658 SSUH2Q9Y2M2 353 aa13.25□□□□□ -0.29
TRAPPC8-205ENST00000578658 SPDYE4A6NLX3 237 aa13.24□□□□□ -0.29
TRAPPC8-205ENST00000578658 FKBP8Q14318 412 aa13.15□□□□□ -0.3
TRAPPC8-205ENST00000578658 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC8-205ENST00000578658 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRAPPC8-205ENST00000578658 PROM2Q8N271 834 aa13.05□□□□□ -0.32
TRAPPC8-205ENST00000578658 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
TRAPPC8-205ENST00000578658 SPDYE1Q8NFV5 336 aaPredicted RBP12.97□□□□□ -0.33
TRAPPC8-205ENST00000578658 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
TRAPPC8-205ENST00000578658 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
TRAPPC8-205ENST00000578658 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
TRAPPC8-205ENST00000578658 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
TRAPPC8-205ENST00000578658 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC8-205ENST00000578658 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
TRAPPC8-205ENST00000578658 FBXO3Q9UK99 471 aa12.72□□□□□ -0.37
TRAPPC8-205ENST00000578658 PRKAR2AP13861 404 aaKnown RBP12.63□□□□□ -0.39
TRAPPC8-205ENST00000578658 POTEHQ6S545 545 aa12.62□□□□□ -0.39
TRAPPC8-205ENST00000578658 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
TRAPPC8-205ENST00000578658 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
TRAPPC8-205ENST00000578658 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC8-205ENST00000578658 MIER1Q8N108 512 aa12.55□□□□□ -0.4
TRAPPC8-205ENST00000578658 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
TRAPPC8-205ENST00000578658 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC8-205ENST00000578658 MNX1P50219 401 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-205ENST00000578658 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
TRAPPC8-205ENST00000578658 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC8-205ENST00000578658 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC8-205ENST00000578658 NPM1P06748 294 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRAPPC8-205ENST00000578658 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
TRAPPC8-205ENST00000578658 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
TRAPPC8-205ENST00000578658 HAX1O00165 279 aa12.32□□□□□ -0.44
TRAPPC8-205ENST00000578658 NUBP1P53384 320 aa12.28□□□□□ -0.44
TRAPPC8-205ENST00000578658 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
TRAPPC8-205ENST00000578658 EVX2Q03828 476 aa12.24□□□□□ -0.45
TRAPPC8-205ENST00000578658 RASEFQ8IZ41 740 aa12.24□□□□□ -0.45
TRAPPC8-205ENST00000578658 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
TRAPPC8-205ENST00000578658 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC8-205ENST00000578658 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
TRAPPC8-205ENST00000578658 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC8-205ENST00000578658 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
TRAPPC8-205ENST00000578658 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
TRAPPC8-205ENST00000578658 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms