RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 NUP58Q9BVL2 599 aa16.69■□□□□ 0.26
CUEDC1-207ENST00000577840 UBN1Q9NPG3 1134 aa16.69■□□□□ 0.26
CUEDC1-207ENST00000577840 DERAQ9Y315 318 aa16.69■□□□□ 0.26
CUEDC1-207ENST00000577840 ITIH6Q6UXX5 1313 aa16.69■□□□□ 0.26
CUEDC1-207ENST00000577840 RALGAPA2Q2PPJ7 1873 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 MGEA5O60502 916 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 IBSPP21815 317 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 AKAP5P24588 427 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 TFAMQ00059 246 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 CBWD3Q5JTY5 395 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 CBWD5Q5RIA9 395 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 C1orf220Q5T0J3 134 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 LMBRD2Q68DH5 695 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 SV2AQ7L0J3 742 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 PPFIBP1Q86W92 1011 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 RPUSD2Q8IZ73 545 aaKnown RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 SPC24Q8NBT2 197 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 RNF169Q8NCN4 708 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 CCDC150Q8NCX0 1101 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 NEK11Q8NG66 645 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 SNX27Q96L92 541 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 TMEM117Q9H0C3 514 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 TSPYL2Q9H2G4 693 aaPredicted RBP16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 IMPACTQ9P2X3 320 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
CUEDC1-207ENST00000577840 ANK1P16157 1881 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 EOMESO95936 686 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 PFKMP08237 780 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 TRIM21P19474 475 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 PBX1P40424 430 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 IKBKEQ14164 716 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 MFSD5Q6N075 450 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 CNKSR3Q6P9H4 555 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 FBXL13Q8NEE6 735 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 CRACR2AQ9BSW2 395 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 LSM14BQ9BX40 385 aaKnown RBP16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
CUEDC1-207ENST00000577840 C9IYK1 514 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 CLSTN1O94985 981 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 C4BPAP04003 597 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 VCANP13611 3396 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 BMP8BP34820 402 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 WNT7BP56706 349 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 TRPC3Q13507 836 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 GPNMBQ14956 572 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 PTPN21Q16825 1174 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 ZACNQ401N2 412 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 WDR44Q5JSH3 913 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 EHBP1Q8NDI1 1231 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 BEST2Q8NFU1 509 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 ZNF516Q92618 1163 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 PDLIM2Q96JY6 352 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 IMPG2Q9BZV3 1241 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 MTMR12Q9C0I1 747 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 RNF39Q9H2S5 420 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 RSAD1Q9HA92 442 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 RAB20Q9NX57 234 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 KLK14Q9P0G3 267 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 LRFN2Q9ULH4 789 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 ZMYND8Q9ULU4 1186 aaPredicted RBP16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 UBQLN1Q9UMX0 589 aaKnown RBP16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
CUEDC1-207ENST00000577840 ENPP3O14638 875 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 NFICP08651 508 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 ACTN1P12814 892 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 KCNMA1Q12791 1236 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 TRAPPC11Q7Z392 1133 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 RTN4RL1Q86UN2 441 aaPredicted RBP16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 EFCAB13Q8IY85 973 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 C7orf61Q8IZ16 206 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 OR5B17Q8NGF7 314 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 INTS2Q9H0H0 1204 aaKnown RBP16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 ELAC1Q9H777 363 aaKnown RBP16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 FAM207AQ9NSI2 230 aaPredicted RBP16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 SLC38A7Q9NVC3 462 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 SIK3Q9Y2K2 1263 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 COQ4Q9Y3A0 265 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 SPTBN5Q9NRC6 3674 aaKnown RBP16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 EYSQ5T1H1 3165 aa16.65■□□□□ 0.26
CUEDC1-207ENST00000577840 HOXA2O43364 376 aa16.64■□□□□ 0.25
CUEDC1-207ENST00000577840 EFCAB14O75071 495 aa16.64■□□□□ 0.25
CUEDC1-207ENST00000577840 ZC3H11AO75152 810 aaKnown RBP eCLIP16.64■□□□□ 0.25
CUEDC1-207ENST00000577840 HLA-DRAP01903 254 aa16.64■□□□□ 0.25
CUEDC1-207ENST00000577840 KRT19P08727 400 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms