RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 ACTRT1Q8TDG2 376 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 CAVIN3Q969G5 261 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 RIOX1Q9H6W3 641 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 TMBIM4Q9HC24 238 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 JPH1Q9HDC5 661 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 F5H423 210 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 ENTPD3O75355 529 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 CAPRIN2Q6IMN6 1127 aaKnown RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 C1orf228Q6PIY5 440 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
RNF43-203ENST00000577716 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
RNF43-203ENST00000577716 CLGNO14967 610 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 ELF1P32519 619 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 NFIAQ12857 509 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 SLC10A5Q5PT55 438 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 ANKRD20A2Q5SQ80 823 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 SYCP2LQ5T4T6 812 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 ANKRD20A1Q5TYW2 823 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 PDZD8Q8NEN9 1154 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 SENP7Q9BQF6 1050 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 MXRA8Q9BRK3 442 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 TMEM8AQ9HCN3 771 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 UBR1Q8IWV7 1749 aa11.52□□□□□ -0.56
RNF43-203ENST00000577716 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 FDX1P10109 184 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 CNGA1P29973 690 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 TAP1Q03518 808 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 NCOA4Q13772 614 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 HEATR6Q6AI08 1181 aaKnown RBP11.52□□□□□ -0.57
RNF43-203ENST00000577716 CREG2Q8IUH2 290 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 PNMA5Q96PV4 448 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 NPHS2Q9NP85 383 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 CAND2O75155 1236 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 ITGA4P13612 1032 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 CIITAP33076 1130 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 TAF1BQ53T94 588 aaPredicted RBP11.52□□□□□ -0.57
RNF43-203ENST00000577716 KLF6Q99612 283 aaPredicted RBP11.52□□□□□ -0.57
RNF43-203ENST00000577716 RTFDC1Q9BY42 306 aaPredicted RBP11.52□□□□□ -0.57
RNF43-203ENST00000577716 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
RNF43-203ENST00000577716 CYP4F11Q9HBI6 524 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
RNF43-203ENST00000577716 PDE2AO00408 941 aaPredicted RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 RALAP11233 206 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 MX2P20592 715 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PHKA2P46019 1235 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CYB5D1Q6P9G0 228 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 RNF149Q8NC42 400 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CCDC124Q96CT7 223 aaKnown RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 FOXP3Q9BZS1 431 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 C2orf40Q9H1Z8 148 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CXorf56Q9H5V9 222 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 THEGQ9P2T0 379 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 C3P01024 1663 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CYTH3O43739 400 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PFDN1O60925 122 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 NR3C2P08235 984 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FNTAP49354 379 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 ESRRGP62508 458 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 COL23A1Q86Y22 540 aaPredicted RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 EPS8L3Q8TE67 593 aaKnown RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 MCEEQ96PE7 176 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 INPP5FQ9Y2H2 1132 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 DCCP43146 1447 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 AFF2P51816 1311 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 CNTNAP4Q9C0A0 1308 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PFDN6O15212 129 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 OATP04181 439 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.51□□□□□ -0.57
RNF43-203ENST00000577716 FSCBQ5H9T9 825 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 MOXD1Q6UVY6 613 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 RAB44Q7Z6P3 723 aaPredicted RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 DTX3LQ8TDB6 740 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 ATG4AQ8WYN0 398 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 SDCCAG3Q96C92 435 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 BTBD6Q96KE9 485 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 WWP1Q9H0M0 922 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 BLOC1S4Q9NUP1 217 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FBXO28Q9NVF7 368 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 AIPL1Q9NZN9 384 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 PSMC3IPQ9P2W1 217 aaPredicted RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 KIAA0391O15091 583 aaKnown RBP11.51□□□□□ -0.57
RNF43-203ENST00000577716 APRTP07741 180 aa11.51□□□□□ -0.57
RNF43-203ENST00000577716 FAM153BP0C7A2 387 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms