RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 WNT7BP56706 349 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 CLDN10P78369 228 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 TRIM14Q14142 442 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 GPNMBQ14956 572 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 SV2AQ7L0J3 742 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 FBXL13Q8NEE6 735 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 BEST2Q8NFU1 509 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 OR5B17Q8NGF7 314 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 DPF3Q92784 378 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 NUP58Q9BVL2 599 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 IMPG2Q9BZV3 1241 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 MTMR12Q9C0I1 747 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
ERCC4-208ENST00000576348 FAM207AQ9NSI2 230 aaPredicted RBP17.82■□□□□ 0.44
ERCC4-208ENST00000576348 CNTN3Q9P232 1028 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 C2CD2Q9Y426 696 aa17.82■□□□□ 0.44
ERCC4-208ENST00000576348 C9IYK1 514 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 RBAK-RBAKDNI3L0D1 243 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 ENPP3O14638 875 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 EOMESO95936 686 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 PFKMP08237 780 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 KRT19P08727 400 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 CSF2RAP15509 400 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 MLH1P40692 756 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 PPIGQ13427 754 aaKnown RBP eCLIP17.81■□□□□ 0.44
ERCC4-208ENST00000576348 WDR44Q5JSH3 913 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 GLB1LQ6UWU2 654 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 URGCPQ8TCY9 931 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 IQCDQ96DY2 449 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 SLC38A7Q9NVC3 462 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 INPP5FQ9Y2H2 1132 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 PCDHB7Q9Y5E2 793 aa17.81■□□□□ 0.44
ERCC4-208ENST00000576348 PTPRJQ12913 1337 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 ITIH6Q6UXX5 1313 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 PMM2O15305 246 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 EFCAB14O75071 495 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 HLA-DRAP01903 254 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 KLK7P49862 253 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 MCCD1P59942 119 aaPredicted RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 FPGSQ05932 587 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 NCOA4Q13772 614 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 ZACNQ401N2 412 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 GLRA4Q5JXX5 417 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 TDRD10Q5VZ19 366 aaKnown RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 TRAPPC11Q7Z392 1133 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 CACNA2D4Q7Z3S7 1137 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 RTN4RL1Q86UN2 441 aaPredicted RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 EFCAB13Q8IY85 973 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 ABI1Q8IZP0 508 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 EHBP1Q8NDI1 1231 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 TAS1R2Q8TE23 839 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 LINC01599Q8WXQ3 324 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 ZNF516Q92618 1163 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 FAM84AQ96KN4 292 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 GAD1Q99259 594 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 LBHD1Q9BQE6 289 aaPredicted RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 TMEM161AQ9NX61 479 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 DPP3Q9NY33 737 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 UBQLN1Q9UMX0 589 aaKnown RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 SIK3Q9Y2K2 1263 aa17.8■□□□□ 0.44
ERCC4-208ENST00000576348 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.8■□□□□ 0.44
ERCC4-208ENST00000576348 SMIM28A0A1B0GU29 152 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ABHD14A-ACY1A0A1B0GW23 586 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ARL5CA6NH57 179 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 HOXA2O43364 376 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 C4BPAP04003 597 aaKnown RBP17.79■□□□□ 0.44
ERCC4-208ENST00000576348 KCNE1P15382 129 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 PON1P27169 355 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 PBX1P40424 430 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ZNF397Q8NF99 534 aaPredicted RBP17.79■□□□□ 0.44
ERCC4-208ENST00000576348 CPLX3Q8WVH0 158 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 BADQ92934 168 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ZFP42Q96MM3 310 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ELAC1Q9H777 363 aaKnown RBP17.79■□□□□ 0.44
ERCC4-208ENST00000576348 IL23AQ9NPF7 189 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 RAB20Q9NX57 234 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 IMPACTQ9P2X3 320 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 ITGA11Q9UKX5 1188 aa17.79■□□□□ 0.44
ERCC4-208ENST00000576348 MEFVO15553 781 aaPredicted RBP17.78■□□□□ 0.44
ERCC4-208ENST00000576348 AMHP03971 560 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 THP07101 528 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 ACRP10323 421 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
ERCC4-208ENST00000576348 SLC9A1P19634 815 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 ITGB8P26012 769 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 KCNJ6P48051 423 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 FAM189BP81408 668 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 RBP5P82980 135 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 LRMPQ12912 555 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 TRIM65Q6PJ69 517 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 ALKAL1Q6UXT8 129 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 AGMOQ6ZNB7 445 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 C15orf39Q6ZRI6 1047 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 ZNF598Q86UK7 904 aaKnown RBP17.78■□□□□ 0.44
ERCC4-208ENST00000576348 NT5C1BQ96P26 610 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 PLCB1Q9NQ66 1216 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.78■□□□□ 0.44
ERCC4-208ENST00000576348 RNF19AQ9NV58 838 aa17.78■□□□□ 0.44
ERCC4-208ENST00000576348 CENPFP49454 3210 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms