RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 PLEKHA4Q9H4M7 779 aa33.18■■■□□ 2.9
CTDNEP1-206ENST00000571409 SLC38A7Q9NVC3 462 aa33.18■■■□□ 2.9
CTDNEP1-206ENST00000571409 CNTN3Q9P232 1028 aa33.18■■■□□ 2.9
CTDNEP1-206ENST00000571409 USTQ9Y2C2 406 aa33.18■■■□□ 2.9
CTDNEP1-206ENST00000571409 VWA8A3KMH1 1905 aa33.18■■■□□ 2.9
CTDNEP1-206ENST00000571409 RFPL2O75678 378 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 KCNE1P15382 129 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 MATR3P43243 847 aaKnown RBP eCLIP33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 MCL1Q07820 350 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 LILRA6Q6PI73 481 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 HFE2Q6ZVN8 426 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 KCNN1Q92952 543 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 CCDC39Q9UFE4 941 aa33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 MTCL1Q9Y4B5 1905 aaKnown RBP33.17■■■□□ 2.9
CTDNEP1-206ENST00000571409 TRAK2O60296 914 aa33.16■■■□□ 2.9
CTDNEP1-206ENST00000571409 TBCAO75347 108 aaKnown RBP33.16■■■□□ 2.9
CTDNEP1-206ENST00000571409 C3orf58Q8NDZ4 430 aa33.16■■■□□ 2.9
CTDNEP1-206ENST00000571409 CLSTN3Q9BQT9 956 aa33.16■■■□□ 2.9
CTDNEP1-206ENST00000571409 TBX20Q9UMR3 447 aa33.16■■■□□ 2.9
CTDNEP1-206ENST00000571409 MEFVO15553 781 aaPredicted RBP33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 TXLNAP40222 546 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 PDXDC1Q6P996 788 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 CD300LGQ6UXG3 332 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 KREMEN2Q8NCW0 462 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 HAPLN2Q9GZV7 340 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 STK17AQ9UEE5 414 aa33.15■■■□□ 2.9
CTDNEP1-206ENST00000571409 TMEM221A6NGB7 291 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 M0R296 226 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 SCP2P22307 547 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 FGFR3P22607 806 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 LIG4P49917 911 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 SLC10A6Q3KNW5 377 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 CYP26C1Q6V0L0 522 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 ZDHHC14Q8IZN3 488 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 PLCD3Q8N3E9 789 aa33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 DDX27Q96GQ7 796 aaKnown RBP33.14■■■□□ 2.9
CTDNEP1-206ENST00000571409 TECTAO75443 2155 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 PODXLO00592 558 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 HNRNPDLO14979 420 aaKnown RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 TRAPPC3O43617 180 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 BRCC3P46736 316 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 SIGLEC14Q08ET2 396 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 SLC39A14Q15043 492 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 HSCBQ8IWL3 235 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 SMG7Q92540 1137 aaKnown RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 C18orf25Q96B23 403 aaPredicted RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 ACSF2Q96CM8 615 aaPredicted RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 MORC2Q9Y6X9 1032 aaPredicted RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 PDCD11Q14690 1871 aaKnown RBP33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 TRIOO75962 3097 aa33.13■■■□□ 2.89
CTDNEP1-206ENST00000571409 MYH15Q9Y2K3 1946 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 I3L4J1 428 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 TKTP29401 623 aaKnown RBP33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 RRAGBQ5VZM2 374 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 OTOP3Q7RTS5 596 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 KRI1Q8N9T8 703 aaKnown RBP33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 ZNF707Q96C28 371 aaPredicted RBP33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 FIZ1Q96SL8 496 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 RHOBTB2Q9BYZ6 727 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 ZDHHC7Q9NXF8 308 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 LIMD1Q9UGP4 676 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 SORCS3Q9UPU3 1222 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 GTF3C3Q9Y5Q9 886 aa33.12■■■□□ 2.89
CTDNEP1-206ENST00000571409 ADAM12O43184 909 aa33.11■■■□□ 2.89
CTDNEP1-206ENST00000571409 PIGRP01833 764 aa33.11■■■□□ 2.89
CTDNEP1-206ENST00000571409 CXCL8P10145 99 aa33.11■■■□□ 2.89
CTDNEP1-206ENST00000571409 NMT1P30419 496 aaKnown RBP33.11■■■□□ 2.89
CTDNEP1-206ENST00000571409 FBXW11Q9UKB1 542 aa33.11■■■□□ 2.89
CTDNEP1-206ENST00000571409 PAPLNO95428 1278 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 ASGR2P07307 311 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 CLTAP09496 248 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 DYMQ7RTS9 669 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 MFSD14AQ96MC6 490 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 PIDD1Q9HB75 910 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 WDR6Q9NNW5 1121 aaKnown RBP33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 MTRRQ9UBK8 725 aa33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 ARIH1Q9Y4X5 557 aaPredicted RBP33.1■■■□□ 2.89
CTDNEP1-206ENST00000571409 CLUHO75153 1309 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 ZMYND10O75800 440 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 RPL9P32969 192 aaKnown RBP33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 TNFSF9P41273 254 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 NASPP49321 788 aaPredicted RBP33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 GTF2BQ00403 316 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 MTMR3Q13615 1198 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 BMP8AQ7Z5Y6 402 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 PBXIP1Q96AQ6 731 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 PRKD2Q9BZL6 878 aa33.09■■■□□ 2.89
CTDNEP1-206ENST00000571409 ABCD1P33897 745 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 OR1D2P34982 312 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 STK38Q15208 465 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 LIN9Q5TKA1 542 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 SV2BQ7L1I2 683 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 MAP4K3Q8IVH8 894 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 DDX12PQ92771 950 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 PLEKHA5Q9HAU0 1116 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 NUB1Q9Y5A7 615 aa33.08■■■□□ 2.89
CTDNEP1-206ENST00000571409 HSP90AA1P07900 732 aaKnown RBP33.07■■■□□ 2.88
CTDNEP1-206ENST00000571409 SPAG1Q07617 926 aa33.07■■■□□ 2.88
CTDNEP1-206ENST00000571409 KYAT1Q16773 422 aa33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms