RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PLEKHG4Q58EX7 1191 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 SFRP5Q5T4F7 317 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 BMP8AQ7Z5Y6 402 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 PPFIBP1Q86W92 1011 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 PLD6Q8N2A8 252 aaKnown RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 OR6P1Q8NGX9 317 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 HNRNPLLQ8WVV9 542 aaKnown RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 SREK1Q8WXA9 508 aaKnown RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 PRRX2Q99811 253 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 KATNAL1Q9BW62 490 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 LRRCC1Q9C099 1032 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 ZBTB40Q9NUA8 1239 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 FAM86C1Q9NVL1 165 aa6.56□□□□□ -1.36
CDH13-211ENST00000568770 PTPRZ1P23471 2315 aaPredicted RBP6.56□□□□□ -1.36
CDH13-211ENST00000568770 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 GRM6O15303 877 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 LINC01565O15544 149 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 KLF4O43474 513 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 TBX10O75333 385 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 CSPG5O95196 566 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 F2P00734 622 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 FOSL1P15407 271 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 ITIH2P19823 946 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 CTNNB1P35222 781 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 SMAD4Q13485 552 aaKnown RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 STXBP2Q15833 593 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 PKN1Q16512 942 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 USH1GQ495M9 461 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 SERINC5Q86VE9 423 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 SUGP1Q8IWZ8 645 aaKnown RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 DHX37Q8IY37 1157 aaKnown RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 PPTC7Q8NI37 304 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 TBC1D5Q92609 795 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 TAAR1Q96RJ0 339 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 TMEM47Q9BQJ4 181 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 IFIH1Q9BYX4 1025 aaKnown RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 ALG13Q9NP73 1137 aaKnown RBP6.55□□□□□ -1.36
CDH13-211ENST00000568770 CD207Q9UJ71 328 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 MAPK8IP1Q9UQF2 711 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 FAM186AA6NE01 2351 aa6.55□□□□□ -1.36
CDH13-211ENST00000568770 WDR19Q8NEZ3 1342 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 FNDC1Q4ZHG4 1894 aaPredicted RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 WASH4PA8MWX3 477 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 C5orf67F2Z3F1 127 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 FOXP2O15409 715 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 PDHBP11177 359 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 TOP1P11387 765 aaKnown RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 BMPR1AP36894 532 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 CCNFP41002 786 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 ETV3P41162 512 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 ZXDAP98168 799 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 TNK2Q07912 1038 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 ADAM15Q13444 863 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 TDRD10Q5VZ19 366 aaKnown RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 FIBCD1Q8N539 461 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 CELF2-AS1Q8N7Q2 184 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 C19orf47Q8N9M1 422 aaKnown RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 NSUN6Q8TEA1 469 aaKnown RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 RNF141Q8WVD5 230 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 SEPT8Q92599 483 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 ATOH1Q92858 354 aaPredicted RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 ATP6V0A1Q93050 837 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 IL17RAQ96F46 866 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 GPATCH3Q96I76 525 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 IWS1Q96ST2 819 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDH13-211ENST00000568770 COL20A1Q9P218 1284 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 SUCOQ9UBS9 1254 aaKnown RBP6.54□□□□□ -1.36
CDH13-211ENST00000568770 PNMA2Q9UL42 364 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 CAPN6Q9Y6Q1 641 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 LAMA4Q16363 1823 aa6.54□□□□□ -1.36
CDH13-211ENST00000568770 BAZ2BQ9UIF8 2168 aaKnown RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 LOC730098B7Z3J9 87 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 ORC4O43929 436 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 PPFIA4O75335 1185 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 CLEC3AO75596 197 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 EIF3JO75822 258 aaKnown RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 EYA4O95677 639 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 TP53P04637 393 aaPredicted RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 RB1P06400 928 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 LINC00271P0C7V0 271 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 NDUFV1P49821 464 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 VCPP55072 806 aaKnown RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 ZNF543Q08ER8 600 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 SNW1Q13573 536 aaKnown RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 CAMK1Q14012 370 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 MSMPQ1L6U9 139 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 HSDL1Q3SXM5 330 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 RRP12Q5JTH9 1297 aaKnown RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 SPACA3Q8IXA5 215 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 SYTL5Q8TDW5 730 aaPredicted RBP6.53□□□□□ -1.36
CDH13-211ENST00000568770 KLHL6Q8WZ60 621 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 MSLNLQ96KJ4 702 aa6.53□□□□□ -1.36
CDH13-211ENST00000568770 DRC1Q96MC2 740 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms