RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TRIOO75962 3097 aa15.79■□□□□ 0.12
CMTM3-215ENST00000568477 TRIP11Q15643 1979 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 PLXNA3P51805 1871 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 CCDC195A0A1B0GUA6 201 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 TMEM221A6NGB7 291 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 M0R296 226 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 STX6O43752 255 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 KCNE1P15382 129 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 TXLNAP40222 546 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 ZNF131P52739 623 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 MCL1Q07820 350 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 UPP1Q16831 310 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 SPECC1Q5M775 1068 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 USP49Q70CQ1 688 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 OTOP3Q7RTS5 596 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 PLCD3Q8N3E9 789 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 KREMEN2Q8NCW0 462 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 LNX1Q8TBB1 728 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-215ENST00000568477 SNX21Q969T3 373 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 ACSF2Q96CM8 615 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-215ENST00000568477 EPSTI1Q96J88 318 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 RHOBTB2Q9BYZ6 727 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 CNTN3Q9P232 1028 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
CMTM3-215ENST00000568477 ARIH1Q9Y4X5 557 aaPredicted RBP15.78■□□□□ 0.12
CMTM3-215ENST00000568477 CITO14578 2027 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 HNRNPDLO14979 420 aaKnown RBP15.77■□□□□ 0.12
CMTM3-215ENST00000568477 TRAPPC3O43617 180 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 TRAK2O60296 914 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 RFPL2O75678 378 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 FGFR3P22607 806 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 DDIT3P35638 169 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 LIG4P49917 911 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-215ENST00000568477 SIGLEC14Q08ET2 396 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 LILRA6Q6PI73 481 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 SMG7Q92540 1137 aaKnown RBP15.77■□□□□ 0.12
CMTM3-215ENST00000568477 MFSD14AQ96MC6 490 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 ZMAT2Q96NC0 199 aaKnown RBP15.77■□□□□ 0.12
CMTM3-215ENST00000568477 CLIC6Q96NY7 704 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 USP28Q96RU2 1077 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 CLSTN3Q9BQT9 956 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 ZDHHC7Q9NXF8 308 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 FBXW11Q9UKB1 542 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 TBX20Q9UMR3 447 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 SORCS3Q9UPU3 1222 aa15.77■□□□□ 0.12
CMTM3-215ENST00000568477 MORC2Q9Y6X9 1032 aaPredicted RBP15.77■□□□□ 0.12
CMTM3-215ENST00000568477 DENND4AQ7Z401 1863 aa15.77■□□□□ 0.11
CMTM3-215ENST00000568477 CLUHO75153 1309 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 PODXLO00592 558 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 PIGRP01833 764 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 CLTAP09496 248 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 IGFBP6P24592 240 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-215ENST00000568477 ABCD1P33897 745 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 SLC39A14Q15043 492 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 KYAT1Q16773 422 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 SLC10A6Q3KNW5 377 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 SEZ6Q53EL9 994 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 LIN9Q5TKA1 542 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 RRAGBQ5VZM2 374 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 CD300LGQ6UXG3 332 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 BMP8AQ7Z5Y6 402 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
CMTM3-215ENST00000568477 C3orf58Q8NDZ4 430 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 STAMQ92783 540 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 ZNF707Q96C28 371 aaPredicted RBP15.76■□□□□ 0.11
CMTM3-215ENST00000568477 PIDD1Q9HB75 910 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 WDR6Q9NNW5 1121 aaKnown RBP15.76■□□□□ 0.11
CMTM3-215ENST00000568477 LIMD1Q9UGP4 676 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 ZNF318Q5VUA4 2279 aa15.76■□□□□ 0.11
CMTM3-215ENST00000568477 C2orf16Q68DN1 1984 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 VWA8A3KMH1 1905 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 I3L4J1 428 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 MEFVO15553 781 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-215ENST00000568477 ZMYND10O75800 440 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 PAPLNO95428 1278 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 ASGR2P07307 311 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 CXCL8P10145 99 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 TKTP29401 623 aaKnown RBP15.75■□□□□ 0.11
CMTM3-215ENST00000568477 RPL9P32969 192 aaKnown RBP15.75■□□□□ 0.11
CMTM3-215ENST00000568477 BRCC3P46736 316 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 ANKS3Q6ZW76 656 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 UBALD2Q8IYN6 164 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 PBXIP1Q96AQ6 731 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 C18orf25Q96B23 403 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-215ENST00000568477 PRKD2Q9BZL6 878 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 HAPLN2Q9GZV7 340 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 PLEKHA5Q9HAU0 1116 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 MTRRQ9UBK8 725 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 NUB1Q9Y5A7 615 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.75■□□□□ 0.11
CMTM3-215ENST00000568477 MYO10Q9HD67 2058 aa15.75■□□□□ 0.11
CMTM3-215ENST00000568477 MTCL1Q9Y4B5 1905 aaKnown RBP15.74■□□□□ 0.11
CMTM3-215ENST00000568477 ADAM12O43184 909 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 HSP90AA1P07900 732 aaKnown RBP15.74■□□□□ 0.11
CMTM3-215ENST00000568477 NMT1P30419 496 aaKnown RBP15.74■□□□□ 0.11
CMTM3-215ENST00000568477 OR1D2P34982 312 aa15.74■□□□□ 0.11
CMTM3-215ENST00000568477 PLA2G5P39877 138 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms