RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 DDX56Q9NY93 547 aaKnown RBP8.15□□□□□ -1.1
ATXN3-249ENST00000564606 KLHL14Q9P2G3 628 aa8.15□□□□□ -1.1
ATXN3-249ENST00000564606 ZNF70Q9UC06 446 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-249ENST00000564606 CNOT8Q9UFF9 292 aaKnown RBP8.15□□□□□ -1.1
ATXN3-249ENST00000564606 ASIC3Q9UHC3 531 aa8.15□□□□□ -1.1
ATXN3-249ENST00000564606 DDX20Q9UHI6 824 aaKnown RBP8.15□□□□□ -1.1
ATXN3-249ENST00000564606 PPP1R9AQ9ULJ8 1098 aa8.15□□□□□ -1.1
ATXN3-249ENST00000564606 TBX20Q9UMR3 447 aa8.15□□□□□ -1.1
ATXN3-249ENST00000564606 SMG5Q9UPR3 1016 aaKnown RBP8.15□□□□□ -1.1
ATXN3-249ENST00000564606 PCDHA10Q9Y5I2 948 aa8.15□□□□□ -1.1
ATXN3-249ENST00000564606 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
ATXN3-249ENST00000564606 NFASCO94856 1347 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 GSTTP1A0A1W2PQM5 241 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TLDC2A0PJX2 215 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ZSCAN5CA6NGD5 496 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 RIPK2O43353 540 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 SORBS3O60504 671 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 LRRN2O75325 713 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF189O75820 626 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TJP3O95049 919 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 OATP04181 439 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TRIM49P0CI25 452 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TRIM49CP0CI26 452 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CYP11B1P15538 503 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TSHRP16473 764 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CNGA1P29973 690 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 POLR2BP30876 1174 aaKnown RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 MAP2K2P36507 400 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 GCLMP48507 274 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 PEX5P50542 639 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 LACTBP83111 547 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 XRCC4Q13426 336 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 RIPK1Q13546 671 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 SLC29A2Q14542 456 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CCNG2Q16589 344 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CLEC16AQ2KHT3 1053 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 FAM102BQ5T8I3 360 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 LRRC38Q5VT99 294 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ARHGEF16Q5VV41 709 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 DCAF15Q66K64 600 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 MIS18BP1Q6P0N0 1132 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 RCOR2Q8IZ40 523 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC63Q8NA47 563 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 CFAP61Q8NHU2 1237 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 LMO3Q8TAP4 145 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 PARD3BQ8TEW8 1205 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 POMGNT1Q8WZA1 660 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 RSRC1Q96IZ7 334 aaKnown RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 MFSD14AQ96MC6 490 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 FBXL18Q96ME1 805 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 JPH2Q9BR39 696 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 TRIM31Q9BZY9 425 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 KIAA1683Q9H0B3 1180 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 FAM124BQ9H5Z6 455 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 BATF3Q9NR55 127 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 HAUS2Q9NVX0 235 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 GEMIN8Q9NWZ8 242 aaKnown RBP8.14□□□□□ -1.11
ATXN3-249ENST00000564606 IP6K2Q9UHH9 426 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ANAPC5Q9UJX4 755 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 STRIP2Q9ULQ0 834 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 SNX24Q9Y343 169 aa8.14□□□□□ -1.11
ATXN3-249ENST00000564606 ARFGEF1Q9Y6D6 1849 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 NKRFO15226 690 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 EXTL3O43909 919 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 LSM8O95777 96 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TTC4O95801 387 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ARP10275 920 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ITGA4P13612 1032 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 KRT5P13647 590 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 CHN1P15882 459 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 DRD4P21917 467 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 CALRP27797 417 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 STX2P32856 288 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ADCY8P40145 1251 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 PTGIRP43119 386 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 LIG4P49917 911 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 PEX3P56589 373 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 MRPS25P82663 173 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ATP11AP98196 1134 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 MAP3K10Q02779 954 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 GRM1Q13255 1194 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 RASA2Q15283 850 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 SEPT7Q16181 437 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ANKRD20A8PQ5CZ79 823 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 SPDYAQ5MJ70 313 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TTC19Q6DKK2 380 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 GJB7Q6PEY0 223 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 DRICH1Q6PGQ1 229 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 NUDT18Q6ZVK8 323 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TRPM8Q7Z2W7 1104 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 DDX42Q86XP3 938 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 KATNAL2Q8IYT4 538 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TTC39CQ8N584 583 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms