RNA–Protein interactions for RNA: ENST00000563640.1

CBFA2T3-204, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-204ENST00000563640 SPIRE2Q8WWL2 714 aa17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 MYADMQ96S97 322 aa17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 NTPCRQ9BSD7 190 aaKnown RBP17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 FBXW11Q9UKB1 542 aa17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 CLUHO75153 1309 aa17.15■□□□□ 0.34
CBFA2T3-204ENST00000563640 TMEM189-UBE2V1I3L0A0 370 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 PLCG1P19174 1290 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 FGFR3P22607 806 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 TKTP29401 623 aaKnown RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 LONP1P36776 959 aaKnown RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 BRCC3P46736 316 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 CEBPZQ03701 1054 aaKnown RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 KARSQ15046 597 aaKnown RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 PTPAQ15257 358 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 MPZL3Q6UWV2 235 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 KCTD17Q8N5Z5 321 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 C18orf25Q96B23 403 aaPredicted RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 RHOBTB2Q9BYZ6 727 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 C17orf75Q9HAS0 396 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 WDR6Q9NNW5 1121 aaKnown RBP17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 ANKFY1Q9P2R3 1169 aa17.14■□□□□ 0.33
CBFA2T3-204ENST00000563640 FRYLO94915 3013 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 TSC2P49815 1807 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 SLC26A4O43511 780 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 B3GAT3O94766 335 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 MCF2P10911 925 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 OTOP3Q7RTS5 596 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 RSAD2Q8WXG1 361 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 DDX27Q96GQ7 796 aaKnown RBP17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 CDK5RAP3Q96JB5 506 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 USP28Q96RU2 1077 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 PHOX2BQ99453 314 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 TIPINQ9BVW5 301 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 CCDC94Q9BW85 323 aaPredicted RBP17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 PLEKHA4Q9H4M7 779 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 COL4A3Q01955 1670 aa17.13■□□□□ 0.33
CBFA2T3-204ENST00000563640 ZMYND10O75800 440 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 KCNE1P15382 129 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 UBA7P41226 1012 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 NASPP49321 788 aaPredicted RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 NCKAP1LP55160 1127 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 NTHL1P78549 312 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 TCF15Q12870 199 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 PKP1Q13835 747 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 DHX8Q14562 1220 aaKnown RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 MCM6Q14566 821 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SLC39A14Q15043 492 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SLC10A6Q3KNW5 377 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SPECC1Q5M775 1068 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 ATL3Q6DD88 541 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 GPBP1Q86WP2 473 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SUGP1Q8IWZ8 645 aaKnown RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 UBALD2Q8IYN6 164 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 HDAC7Q8WUI4 952 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 PRKD2Q9BZL6 878 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 KCNK12Q9HB15 430 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 ZDHHC7Q9NXF8 308 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 CNTN3Q9P232 1028 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 TFIP11Q9UBB9 837 aaKnown RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
CBFA2T3-204ENST00000563640 SCN1AP35498 2009 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 C1RP00736 705 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 MARCKSP29966 332 aaPredicted RBP17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 ZNF131P52739 623 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 CREMQ03060 361 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 NOLC1Q14978 699 aaKnown RBP eCLIP17.11■□□□□ 0.331e-6■■□□□ 13.5
CBFA2T3-204ENST00000563640 STK38Q15208 465 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 DCLRE1AQ6PJP8 1040 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 CALML4Q96GE6 196 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 ACAP3Q96P50 834 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 TOPORSQ9NS56 1045 aaPredicted RBP17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 KCND2Q9NZV8 630 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 RIF1Q5UIP0 2472 aaKnown RBP17.11■□□□□ 0.33
CBFA2T3-204ENST00000563640 PODXLO00592 558 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 FAM189A1O60320 539 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 TOM1L1O75674 476 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 C8AP07357 584 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 CXCL8P10145 99 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 AVPR2P30518 371 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 OR1D2P34982 312 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 TNFSF9P41273 254 aa17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 YARSP54577 528 aaKnown RBP17.1■□□□□ 0.33
CBFA2T3-204ENST00000563640 SPAG1Q07617 926 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms