RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 GLRA4Q5JXX5 417 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 CD300LGQ6UXG3 332 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 PLCD3Q8N3E9 789 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 C12orf76Q8N812 135 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 LNX1Q8TBB1 728 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 ZMAT2Q96NC0 199 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 ANKFY1Q9P2R3 1169 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 CACNG4Q9UBN1 327 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 A0A0B4J269 797 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 TTC26A0AVF1 554 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 HNRNPDLO14979 420 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 SYN3O14994 580 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 SPTLC2O15270 562 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 OGTO15294 1046 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 TGM5O43548 720 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 FAM189A1O60320 539 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 POU2F2P09086 479 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 GAP43P17677 238 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 CYP3A5P20815 502 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 HOXA9P31269 272 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 CLCNKBP51801 687 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 OSTNP61366 133 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 ZXDAP98168 799 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 SOX4Q06945 474 aaPredicted RBP13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 PSMD5Q16401 504 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 PTPN21Q16825 1174 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 CCDC149Q6ZUS6 474 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 ANKS3Q6ZW76 656 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 BMP8AQ7Z5Y6 402 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 HASPINQ8TF76 798 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 DDX12PQ92771 950 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 BICD1Q96G01 975 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 B3GALT6Q96L58 329 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 HAPLN2Q9GZV7 340 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 OLFML3Q9NRN5 406 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 BACE2Q9Y5Z0 518 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
NSMCE1-204ENST00000563273 FRMD3A2A2Y4 597 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 C2CD4DB7Z1M9 353 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 PODXLO00592 558 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 MEFVO15553 781 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 PPP1R37O75864 691 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 HSP90AA1P07900 732 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 ZSCAN22P10073 491 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 PAX3P23760 479 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 LRPAP1P30533 357 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 ALCAMQ13740 583 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 RAB33AQ14088 237 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 STK38Q15208 465 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 SLFN12LQ6IEE8 588 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 OTOP3Q7RTS5 596 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 CD302Q8IX05 232 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 TDRD5Q8NAT2 981 aaKnown RBP13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 C3orf58Q8NDZ4 430 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 STRA6Q9BX79 667 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 CUEDC2Q9H467 287 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 CDH22Q9UJ99 828 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 FBXW11Q9UKB1 542 aa13.33□□□□□ -0.28
NSMCE1-204ENST00000563273 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 FAM86C2PA6NEL3 165 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 MYMKA6NI61 221 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 XPOTO43592 962 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 ZMYND10O75800 440 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 HARSP12081 509 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 STAT6P42226 847 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 UVSSAQ2YD98 709 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 KANK3Q6NY19 840 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 SLC39A4Q6P5W5 647 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 TRIM67Q6ZTA4 783 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 UBALD2Q8IYN6 164 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 STAMQ92783 540 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 ZNF707Q96C28 371 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 PRKD2Q9BZL6 878 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 LRRC27Q9C0I9 530 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 GOLGA2P5Q9HBQ8 144 aa13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 UBQLN1Q9UMX0 589 aaKnown RBP13.32□□□□□ -0.28
NSMCE1-204ENST00000563273 TDRD15B5MCY1 1934 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms